Combined single-cell and spatial transcriptomics reveal the molecular, cellular and spatial bone marrow niche organization

• Spatial multi-omics reveals targetable immunosuppressive macrophage T-cell interactions in human AML bone marrow

  2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Acute Myeloid Leukemia Research Open access

  0

  citations
• Wnt‐dependent spatiotemporal reprogramming of bone marrow niches drives fibrosis

  2026 HemaSphere article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access

  3

  citations
• Advances and challenges in cell–cell communication inference: a comprehensive review of tools, resources, and future directions

  2025 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  39

  citations
• Wnt-dependent spatiotemporal reprogramming of bone marrow niches drives fibrosis

  2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access

  1

  citations
• Non-canonical Hedgehog signaling mediates profibrotic hematopoiesis-stroma crosstalk in myeloproliferative neoplasms

  2023 Cell Reports article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access

  9

  citations
• Single-cell RNA-sequence analysis of human bone marrow reveals new targets for isolation of skeletal stem cells using spherical nucleic acids

  2023 Journal of Tissue Engineering article Medicine Mesenchymal stem cell research Open access

  4

  citations
• Single cell metabolism: current and future trends

  2022 Metabolomics article Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access

  61

  citations
• Detection of cell markers from single cell RNA-seq with sc2marker

  2022 BMC Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  25

  citations
• Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data

  2022 Nature Communications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 1 patent

  670

  citations
• The EHA Research Roadmap: Hematopoietic Stem Cells and Allotransplantation.

  2022 Apollo (University of Cambridge) other Medicine Hematopoietic Stem Cell Transplantation Open access

  1

  citations
• The EHA Research Roadmap: Hematopoietic Stem Cells and Allotransplantation

  2022 HemaSphere article Medicine Hematopoietic Stem Cell Transplantation Open access

  1

  citations
• Single-cell analysis of cultured bone marrow stromal cells reveals high similarity to fibroblasts in situ

  2022 Experimental Hematology article Medicine Mesenchymal stem cell research Open access

  7

  citations
• The EHA Research Roadmap: Normal Hematopoiesis.

  2021 Utrecht University Repository (Utrecht University) article Medicine Hematopoietic Stem Cell Transplantation Open access

  1

  citations
• The EHA Research Roadmap: Normal Hematopoiesis

  2021 HemaSphere article Medicine Hematopoietic Stem Cell Transplantation Open access

  1

  citations
• From cell to cell: Identification of actionable targets in bone marrow fibrosis using single-cell technologies

  2021 Experimental Hematology article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access

  4

  citations
• Still a burning question: the interplay between inflammation and fibrosis in myeloproliferative neoplasms

  2021 Current Opinion in Hematology article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access

  41

  citations
• Cell-cell Communication Inference from Single-cell RNA-Seq Data: a Comparison of Methods and Resources

  2021 Research Square preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  3

  citations
• Comparison of Resources and Methods to infer Cell-Cell Communication from Single-cell RNA Data

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  23

  citations
• Mesenchymal Stromal Cells as a Cellular Target in Myeloid Malignancy: Chances and Challenges in the Genome Editing of Stromal Alterations

  2021 Frontiers in Genome Editing article Medicine Acute Myeloid Leukemia Research Open access

  5

  citations
• Heterogeneous bone-marrow stromal progenitors drive myelofibrosis via a druggable alarmin axis

  2020 Cell stem cell article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access cited by 3 patents

  184

  citations

20 results