Identifying specificity groups in the T cell receptor repertoire

• T cell immunomonitoring: a comparative analysis of traditional and novel methods to quantify and characterize human antigen-specific T cells

  2026 Nature Protocols article Immunology and Microbiology T-cell and B-cell Immunology

  0

  citations
• Mtb HLA-E-tetramer-sorted CD8+ T cells have a diverse TCR repertoire

  2024 iScience article Immunology and Microbiology T-cell and B-cell Immunology Open access

  8

  citations
• Virus-reactive T cells expanded in aplastic anemia eliminate hematopoietic progenitor cells by molecular mimicry

  2024 Blood article Immunology and Microbiology T-cell and B-cell Immunology Open access

  27

  citations
• Best practices for single-cell analysis across modalities

  2023 Nature Reviews Genetics review Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 7 patents

  1,043

  citations
• T cell receptor repertoires associated with control and disease progression following Mycobacterium tuberculosis infection

  2023 Nature Medicine article Medicine Tuberculosis Research and Epidemiology Open access cited by 2 patents

  110

  citations
• Challenges in neoantigen-directed therapeutics

  2022 Cancer Cell article Medicine Cancer Immunotherapy and Biomarkers Open access cited by 1 patent

  143

  citations
• Reference-based comparison of adaptive immune receptor repertoires

  2022 Cell Reports Methods article Immunology and Microbiology T-cell and B-cell Immunology Open access

  24

  citations
• Reference-based comparison of adaptive immune receptor repertoires

  2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access

  5

  citations
• The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires

  2021 Nature Machine Intelligence article Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access

  88

  citations
• immuneML: an ecosystem for machine learning analysis of adaptive immune receptor repertoires

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access

  17

  citations
• Keratinocyte differentiation antigen-specific T cells in immune checkpoint inhibitor-treated NSCLC patients are associated with improved survival

  2021 OncoImmunology article Medicine Cancer Immunotherapy and Biomarkers Open access

  9

  citations

11 results