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Papers per year
Papers 210
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Benchmarking of shotgun sequencing depth reveals the potential and limitations of shallow metagenomics and strain-level analysis2026 Nature Microbiology article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Nicole Simone Treichel, Charlie Pauvert, Joana Séneca, Petra Pjevac, David Berry, John Penders, +2 more
16citations -
The Genomes of the Livebearing Fish Species Poeciliopsis retropinna and Poeciliopsis turrubarensis Reflect Their Different Reproductive Strategies2020 Molecular Biology and Evolution article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Henri van Kruistum, Michael W Guernsey, Julie C. Baker, Susan L. Kloet, Martien A. M. Groenen, Bart J. A. Pollux, +1 more
15citations -
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ann M. Mc Cartney, Giulio Formenti, Alice Mouton, Diego N. De Panis, Luísa S. Marins, Henrique G. Leitão, +93 more
15citations -
Complete Genome Sequence and Annotation of the Paracoccus pantotrophus Type Strain DSM 29442020 Microbiology Resource Announcements article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Julia A. Bockwoldt, Martín Zimmermann, Till Tiso, Lars M. Blank
14citations -
LAMPA, LArge Multidomain Protein Annotator, and its application to RNA virus polyproteins2020 Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Anastasia A. Gulyaeva, Andrey I Sigorskih, Elena S Ocheredko, Dmitry V. Samborskiy, Alexander E. Gorbalenya
14citations -
Performance of Five Metagenomic Classifiers for Virus Pathogen Detection Using Respiratory Samples from a Clinical Cohort2022 Pathogens article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ellen C. Carbo, Igor A. Sidorov, Anneloes L. van Rijn-Klink, Sander van Boheemen, Hailiang Mei, Pieter Sicco Hiemstra, +4 more
14citations -
baseLess: lightweight detection of sequences in raw MinION data2023 Bioinformatics Advances article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ben Noordijk, Reindert Nijland, Víctor J. Carrión, Jos M. Raaijmakers, Dick de Ridder, Carlos Victor de Lannoy
14citations -
A global survey of the transcriptome of the opium poppy (Papaver somniferum) based on single‐molecule long‐read isoform sequencing2022 The Plant Journal article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies
Tun Xu, Xiaofei Yang, Yanyan Jia, Zihang Li, Guangbo Tang, Xiujuan Li, +5 more
13citations -
Fusion transcripts and their genomic breakpoints in polyadenylated and ribosomal RNA–minus RNA sequencing data2021 GigaScience article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Youri Hoogstrate, Malgorzata A. Komor, René Böttcher, Job van Riet, Harmen J.G. van de Werken, Stef van Lieshout, +22 more
13citations -
Microbial diversity characterization of seawater in a pilot study using Oxford Nanopore Technologies long-read sequencing2021 BMC Research Notes article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Michael K. Liem, Tonny J. G. Regensburg‐Tuïnk, Christiaan V. Henkel, Hans J. Jansen, Herman P. Spaink
10citations -
Phylogenomics yields new systematic and taxonomical insights for Lissotriton newts, a genus with a strong legacy of introgressive hybridization2024 Molecular Phylogenetics and Evolution article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Stephanie Koster, Wiesław Babik, J. France, Konstantinos Kalaentzis, Christos Kazilas, Íñigo Martínez-Solano, +2 more
9citations -
TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome2022 ISME Communications article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Elizabeth McDaniel, Joris J.M. van Steenbrugge, Daniel R. Noguera, Katherine D. McMahon, Jos M. Raaijmakers, Marnix H. Medema, +1 more
9citations -
Lineage-specific microbial protein prediction enables large-scale exploration of protein ecology within the human gut2025 Nature Communications article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Matthias A. Schmitz, Nicholas J Dimonaco, Thomas Clavel, Thomas C. A. Hitch
8citations -
Automating the Illumina DNA library preparation kit for whole genome sequencing applications on the flowbot ONE liquid handler robot2024 Scientific Reports article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Erin Meijers, Fabienne B. Verhees, Dennis Heemskerk, Els Wessels, Eric C. J. Claas, Stefan A. Boers
8citations -
300 Million years of coral treaders (Insecta: Heteroptera: Hermatobatidae) back to the ocean in the phylogenetic context of Arthropoda2023 Proceedings of the Royal Society B Biological Sciences article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Yanhui Wang, Yun‐Xia Luan, Jiuyang Luo, Yu Men, Michael S. Engel, Jakob Damgaard, +4 more
8citations -
Handling of Spurious Sequences Affects the Outcome of High-Throughput 16S rRNA Gene Amplicon Profiling2020 Research Square preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Thomas Clavel, Sandra Reitmeier, Thomas CA Hitch, Nicole Simone Treichel, Nikolaos Fikas, Bela Hausmann, +5 more
7citations
Most active Aachen authors
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Thomas C. A. Hitch 3,323 citations overall17 papers
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Thomas Clavel 20,038 citations overall16 papers
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Rutger Aldo Vos 5,443 citations overall12 papers
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Eric C. J. Claas 13,774 citations overall11 papers
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Jutte J.C. de Vries 3,220 citations overall11 papers
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Hannes Svardal 10,353 citations overall10 papers
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Kai Ye 99,895 citations overall9 papers
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Igor A. Sidorov 13,275 citations overall9 papers
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Nicole Simone Treichel 930 citations overall9 papers
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Ben Wielstra 2,788 citations overall8 papers
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George Sangster 2,231 citations overall8 papers
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Stefan A. Boers 1,305 citations overall8 papers
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Jolanda A. Luksenburg 828 citations overall8 papers
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Georg Zeller 26,904 citations overall7 papers
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Aloys C.M. Kroes 7,676 citations overall7 papers