Computational Life Science

• Anna Matuszyńska

  Cluster of Excellence on Plant Sciences · Heinrich Heine University Düsseldorf Biochemistry, Genetics and Molecular Biology
  328

  citations

  10

  h-index

  43

  Aachen papers
• El-Hadji Malick Cisse

  Agricultural Research Service · United States Department of Agriculture Agricultural and Biological Sciences
  290

  citations

  10

  h-index

  2

  Aachen papers
• Marvin van Aalst

  RWTH Aachen University Biochemistry, Genetics and Molecular Biology
  240

  citations

  8

  h-index

  13

  Aachen papers
• Andreas Nakielski

  Biochemistry, Genetics and Molecular Biology
  110

  citations

  4

  h-index

  2

  Aachen papers
• Tim Nies

  RWTH Aachen University Biochemistry, Genetics and Molecular Biology
  106

  citations

  6

  h-index

  7

  Aachen papers
• Josha Ebeling

  RWTH Aachen University Biochemistry, Genetics and Molecular Biology
  19

  citations

  2

  h-index

  2

  Aachen papers
• Elena Kullmann

  University of Bonn Biochemistry, Genetics and Molecular Biology
  15

  citations

  2

  h-index

  2

  Aachen papers
• Tobias Pfennig

  Cluster of Excellence on Plant Sciences · Heinrich Heine University Düsseldorf Biochemistry, Genetics and Molecular Biology
  14

  citations

  2

  h-index

  12

  Aachen papers
• Quang Huy Nguyen

  Cluster of Excellence on Plant Sciences · Heinrich Heine University Düsseldorf Computer Science
  1

  citations

  1

  h-index

  2

  Aachen papers
• Tanvir Hassan

  RWTH Aachen University Engineering
  1

  citations

  1

  h-index

  11

  Aachen papers
• Sarah Philipps

  RWTH Aachen University Computer Science
  0

  citations

  0

  h-index

  1

  Aachen papers
• Elouën Corvest

  RWTH Aachen University Biochemistry, Genetics and Molecular Biology
  0

  citations

  0

  h-index

  5

  Aachen papers
• Frederic Radzio

  RWTH Aachen University Energy
  0

  citations

  0

  h-index

  1

  Aachen papers
• Tanvir Hassan

  RWTH Aachen University Biochemistry, Genetics and Molecular Biology
  0

  citations

  0

  h-index

  1

  Aachen papers
• Maja Strauch

  RWTH Aachen University Environmental Science
  0

  citations

  0

  h-index

  1

  Aachen papers

15 results

• A new era of synthetic biology—microbial community design

  2024 Synthetic Biology article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  42

  citations
• Shifts in carbon partitioning by photosynthetic activity increase terpenoid synthesis in glandular trichomes

  2023 The Plant Journal article Biochemistry, Genetics and Molecular Biology Plant biochemistry and biosynthesis Open access

  10

  citations
• Shedding light on blue-green photosynthesis: A wavelength-dependent mathematical model of photosynthesis in Synechocystis sp. PCC 6803

  2024 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Photosynthetic Processes and Mechanisms Open access

  9

  citations
• Microbial markets: socio-economic perspective in studying microbial communities

  2024 microLife article Social Sciences Evolutionary Game Theory and Cooperation Open access

  6

  citations
• Shedding light on blue-green photosynthesis: A wavelength-dependent mathematical model of photosynthesis in Synechocystis sp. PCC 6803

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Photosynthetic Processes and Mechanisms Open access

  2

  citations
• Estimating the redox state of the plastoquinone pool in algae and cyanobacteria via OJIP fluorescence: perspectives and limitations

  2026 Photosynthesis Research article Biochemistry, Genetics and Molecular Biology Photosynthetic Processes and Mechanisms Open access

  1

  citations
• Web-based collaborative model development in interdisciplinary consortia: Design principles and practical guidance

  2026 PLoS Biology article Engineering Design Education and Practice Open access

  1

  citations
• Hackathons as essential tools in an interdisciplinary biological training - report from trainings for Sub-saharan students

  2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Engineering Biomedical and Engineering Education Open access

  1

  citations
• MxlPy—Python package for mechanistic learning and hybrid modelling in life science

  2024 Bioinformatics Advances software-paper Mathematics Mathematical Biology Tumor Growth Open access

  1

  citations
• Shifts in carbon partitioning by photosynthetic activity increase terpenoid synthesis in glandular trichomes

  2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Plant biochemistry and biosynthesis Open access

  0

  citations
• Computational Photosynthesis (ComPhot): Simulation-Based Learning Platform to Study Photosynthesis

  2024 The Plant Cell article Computer Science Distributed and Parallel Computing Systems Open access

  0

  citations
• Assembly and Quantification of Co-Cultures Combining Heterotrophic Yeast with Phototrophic Sugar-Secreting Cyanobacteria

  2024 Journal of Visualized Experiments article Energy Algal biology and biofuel production Open access

  0

  citations
• MxlPy - Python Package for Mechanistic Learning in Life Science

  2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetics, Bioinformatics, and Biomedical Research Open access

  0

  citations
• Estimating the redox state of the plastoquinone pool in algae and cyanobacteria via OJIP fluorescence: perspectives and limitations

  2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Photosynthetic Processes and Mechanisms Open access

  0

  citations
• Correction to: Estimating the redox state of the plastoquinone pool in algae and cyanobacteria via OJIP fluorescence: perspectives and limitations

  2026 Photosynthesis Research erratum Biochemistry, Genetics and Molecular Biology Photosynthetic Processes and Mechanisms Open access

  0

  citations
• Window-integrated photobioreactors: a proof-of-concept for green building retrofitting

  2026 Frontiers in Built Environment article Agricultural and Biological Sciences Light effects on plants Open access

  0

  citations
• Context-dependent siderophore exploitability shapes microbial community structure

  2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Social Sciences Evolutionary Game Theory and Cooperation Open access

  0

  citations
• Cooperation, privatization and cheating in microbial exoenzyme synthesis: theoretical analysis in view of biotechnological applications

  2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Social Sciences Evolutionary Game Theory and Cooperation Open access

  0

  citations
• Disentangling the sucrose metabolism of the corn smut Ustilago maydis reveals unexpected complexity

  2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Fungal and yeast genetics research Open access

  0

  citations
• Fluorescence as an inverse problem: Diagnosing PETC–CBB limitations in dynamic environments

  2026 Molecular Plant article Medicine Optical Imaging and Spectroscopy Techniques

  0

  citations