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SynCom101: A web-based platform for the standardized design of functionally tailored synthetic microbial communities2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health
Jiayi Jing, Siemen Rockx, Aster Liu, Chrats Melkonian, Jos M. Raaijmakers, Paolina Garbeva, +1 more
0citations -
Interactive data exploration websites for large-scale electrophysiology2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Undergraduate Neuroscience Education and Research Open access
Daniel Birman, Gaelle A. Chapuis, Mayo Faulkner, Cyrille Rossant, Julius Benson, Anne K. Churchland, +17 more
1citations -
The Lettuce Expression Browser: from lab to LEB2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Molecular Biology Research Open access
Dirk‐Jan M. van Workum, Esther S. van den Bergh, Siddhant S. Shetty, Jelmer van Lieshout, Tao Feng, Marrit C. Alderkamp, +12 more
1citations -
immuneML: an ecosystem for machine learning analysis of adaptive immune receptor repertoires2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access
Milena Pavlović, Lonneke Scheffer, Keshav Motwani, Chakravarthi Kanduri, Radmila Kompova, Nikolay Vazov, +37 more
17citations -
The Molecular Human – A Roadmap of Molecular Interactions Linking Multiomics Networks with Disease Endpoints2022 medRxiv preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Anna Halama, Shaza B. Zaghlool, Gaurav Thareja, Sara Abdul Kader, Wadha Al Muftha, Marjonneke J. Mook-Kanamori, +17 more
5citations -
LogoMotif: a comprehensive database of transcription factor binding site profiles in Actinobacteria2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Microbial Natural Products and Biosynthesis Open access
Hannah E. Augustijn, Dimitris Karapliafis, K. Joosten, Sébastien Rigali, Gilles P. van Wezel, Marnix H. Medema
3citations -
Utilizing gene co-expression networks with the rat kidney TXG-MAPr tool to enhance safety assessment, biomarker identification and human translation2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Steven J. Kunnen, Giulia Callegaro, Jeffrey J. Sutherland, Panuwat Trairatphisan, Hugo W van Kessel, Lukas S. Wijaya, +11 more
1citations
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