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A neural code for egocentric spatial maps in the human medial temporal lobe2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Memory and Neural Mechanisms Open access
Lukas Kunz, Armin Brandt, Peter Christoph Reinacher, Bernhard P. Staresina, Eric T. Reifenstein, Christoph T. Weidemann, +6 more
39citations -
AutoSourceID-Classifier. Star-Galaxy Classification using a Convolutional Neural Network with Spatial Information2023 arXiv (Cornell University) preprint Physics and Astronomy Galaxies: Formation, Evolution, Phenomena Open access
Fiorenzo Stoppa, Saptashwa Bhattacharyya, Paul M. Vreeswijk, S. Caron, Gabrijela Zaharijaš, S. Bloemen, +6 more
1citations -
NS-Forest: A machine learning method for the objective identification of minimum marker gene combinations for cell type determination from single cell RNA sequencing2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Brian D. Aevermann, Yun Zhang, Mark A. Novotny, Trygve E. Bakken, Jeremy A. Miller, Rebecca D. Hodge, +3 more
12citations -
A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing2021 Genome Research preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Brian D. Aevermann, Yun Zhang, Mark A. Novotny, Mohamed Keshk, Trygve E. Bakken, Jeremy A. Miller, +4 more
96citations -
Site-specific analysis reveals candidate cross-kingdom small RNAs, tRNA and rRNA fragments, and signs of fungal RNA phasing in the barley-powdery mildew interaction2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Powdery Mildew Fungal Diseases Open access
Stefan Kusch, Mansi Singh, Hannah Thieron, Pietro D. Spanu, Ralph Panstruga
6citations -
TransDeepLab: Convolution-Free Transformer-based DeepLab v3+ for Medical Image Segmentation2022 arXiv (Cornell University) preprint Computer Science Medical Image Segmentation Techniques Open access
Reza Azad, Moein Heidari, Moein Shariatnia, Ehsan Khodapanah Aghdam, Sanaz Karimijafarbigloo, Ehsan Adeli, +1 more
6citations -
MACA: Marker-based automatic cell-type annotation for single cell expression data2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yang Xu, Simon J. Baumgart, Christian M. Stegmann, Sikander Hayat
2citations -
scDecorr - Feature decorrelation representation learning with domain adaptation enables self-supervised alignment of multiple single-cell experiments0citations
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SIngle cell level Genotyping Using scRna Data (SIGURD)2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martin Graßhoff, Milena Kalmer, Nicolas Chatain, Kim Kricheldorf, Angela Maurer, Ralf Weiskirchen, +2 more
0citations -
PILOT-GM-VAE: Patient-Level Analysis of single cell Disease Atlas with Optimal Transport of Gaussian Mixture Variational Autoencoders2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Mehdi Joodaki, Mina Shaigan, James Shiniti Nagai, Tiago Maié, Christoph Kuppe, Ivan G. Costa
0citations -
scRIPT: a rapid, high-coverage single-cell lineage-tracing method applied to the hematoendothelial differentiation of embryonic stem cells2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Rıdvan Çeti̇n, Eric M. Bindels, Jente van Staalduinen, Lucas Kuijpers, Giulia Picco, Mathijs Arnoud Sanders, +6 more
0citations -
Euclid preparation: LXXXI. The impact of nonparametric star formation histories on spatially resolved galaxy property estimation using synthetic Euclid images2025 ePrints Soton (University of Southampton) preprint Physics and Astronomy Galaxies: Formation, Evolution, Phenomena Open access
C. Gouin, Francesco Shankar, Jenny G. Sorce, N. Aghanim, Stefano Andreon, N. Auricchio, +62 more
0citations -
MSA$^2$Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation2024 arXiv (Cornell University) preprint Computer Science Medical Image Segmentation Techniques Open access
Sina Ghorbani Kolahi, S. Kamal Chaharsooghi, Toktam Khatibi, Afshin Bozorgpour, Reza Azad, Moein Heidari, +2 more
6citations