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Analysis of protein secretion in Bacillus subtilis by combining a secretion stress biosensor strain with an in vivo split GFP assay2023 Microbial Cell Factories article Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Patrick J. Bakkes, Carolin Müller, Marzena Malek, Roland Freudl, Marco Oldiges, Thomas Drepper, +2 more
6citations -
Analysis of protein secretion in Bacillus subtilis by combining a secretion stress biosensor strain with an in vivo split GFP assay2023 Research Square preprint Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Patrick J. Bakkes, Carolin Müller, Marzena Malek, Roland Freudl, Marco Oldiges, Thomas Drepper, +2 more
0citations -
Accelerated strain construction and characterization of C. glutamicum protein secretion by laboratory automation2022 Applied Microbiology and Biotechnology article Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access cited by 1 patent
Carolin Müller, Patrick J. Bakkes, Vera Waffenschmidt, Laura M. Helleckes, Karl‐Erich Jaeger, Wolfgang Wiechert, +3 more
14citations -
De Novo Design of High-Performance Sec-type Signal Peptide via a Hybrid Deep Learning Architecture2025 RWTH Publications (RWTH Aachen) article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Xiaopeng Dai, Xiang-chun Meng, Ying-jun Zhou, Yu Ji, Ulrich Schwaneberg, Zonglin Li
0citations -
Scaling production of GFP1-10 detector protein in E. coli for secretion screening by split GFP assay2021 Microbial Cell Factories article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Carolin Müller, Chika Linda Igwe, Wolfgang Wiechert, Marco Oldiges
12citations -
De Novo Design of High-Performance Sec-type Signal Peptide via a Hybrid Deep Learning Architecture2025 JACS Au article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Xiaopeng Dai, Yingjun Zhou, Zhimin Li, Yu Ji, Ulrich Schwaneberg, Zonglin Li
8citations -
Biosensor-Based Optimization of Cutinase Secretion by Corynebacterium glutamicum2021 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Fungal and yeast genetics research Open access
Patrick J. Bakkes, Carolin Müller, Astrid Bida, Doris Dohmen-Olma, Andreas Knapp, Marco Oldiges, +2 more
19citations -
Explore or exploit? A model‐based screening strategy for PETase secretion by Corynebacterium glutamicum2022 Biotechnology and Bioengineering article Biochemistry, Genetics and Molecular Biology Enzyme Production and Characterization Open access
Laura M. Helleckes, Carolin Müller, Tim Griesbach, Vera Waffenschmidt, Matthias Moch, Michael Osthege, +2 more
22citations -
Effector–host interactome map links type III secretion systems in healthy gut microbiomes to immune modulation2026 Nature Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Veronika Young, Bushra Dohai, Hridi Halder, Jaime Fernandez-Macgregor, Niels S. van Heusden, Thomas C. A. Hitch, +37 more
4citations -
SHIP1 Restrains Hypoxia/Reoxygenation‐Induced Cytokine Secretion in Mouse Bone Marrow–Derived Mast Cells2026 European Journal of Immunology article Immunology and Microbiology Mast cells and histamine Open access
Lara Gubeljak, Jonas Pes, Eren Arik, Aaron T. Fehr, Mara Schietinger, Thomas Wilhelm, +3 more
0citations -
Pulmonary Microvascular Endothelial Cells Support Alveolar Epithelial Growth via Bone Morphogenetic Protein 6 Secretion2025 American Journal of Respiratory Cell and Molecular Biology article Medicine Neonatal Respiratory Health Research Open access
Luke van der Koog, Dyan F. Nugraha, Abilash Ravi, Justina Clarinda Wolters, Peter L. Horvatovich, Ken R. Bracke, +6 more
5citations -
Screening of a genome‐reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion2020 Microbial Biotechnology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Johannes Hemmerich, Carmen Steffens, Sebastian J. Reich, Marc Weiske, Meike Baumgart, Christian Rückert, +6 more
29citations -
Human leukocyte antigen class I antibody-activated endothelium promotes CD206+ M2 macrophage polarization and MMP9 secretion through TLR4 signaling and P-selectin in a model of antibody-mediated rejection and allograft vasculopathy2023 American Journal of Transplantation article Medicine Transplantation: Methods and Outcomes Open access
Jessica Nevarez‐Mejia, Yiping Jin, Harry C. Pickering, Nicole M. Valenzuela, Rebecca A. Sosa, Sebastiaan Heidt, +4 more
17citations -
Small-molecule screen reveals pathways that regulate C4 secretion in stem cell-derived astrocytes2022 Stem Cell Reports article Immunology and Microbiology Complement system in diseases Open access
Francesca A. Rapino, Ted E. Natoli, Francesco Limone, Jack Blank, Matthew Tegtmeyer, William C. Chen, +16 more
19citations -
Signal inhibitory receptor on leukocytes‐1 recognizes bacterial and endogenous amphipathic α‐helical peptides2021 The FASEB Journal article Immunology and Microbiology Antimicrobial Peptides and Activities Open access
Matevž Rumpret, Helen J. von Richthofen, Maarten van der Linden, Geertje H. A. Westerlaken, Cami M. P. Talavera Ormeño, Jos A. G. van Strijp, +4 more
19citations -
A host-vector toolbox for improved secretory protein overproduction in Bacillus subtilis2022 Applied Microbiology and Biotechnology article Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Anna Krüger, Norma Welsch, Alexandra Dürwald, Henrike B. Brundiek, Rainer Wardenga, Henning Piascheck, +7 more
13citations -
Establishment and characterization of a new Pseudomonas aeruginosa infection model using 2D airway organoids and dual RNA sequencing2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bacterial biofilms and quorum sensing Open access
Cayetano Pleguezuelos‐Manzano, Wouter A. G. Beenker, Gijs J. F. van Son, Harry Begthel, Gimano D. Amatngalim, Jeffrey Matthijn Beekman, +2 more
4citations -
Retrofusion of intralumenal MVB membranes parallels viral infection and coexists with exosome release2021 Current Biology article Biochemistry, Genetics and Molecular Biology Cellular transport and secretion Open access
Priscillia Perrin, Lennert Janssen, Hans Janssen, Bram van den Broek, Daphne M. van Elsland, Ilana Berlin, +1 more
82citations