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Distinct regulatory networks control toxin gene expression in elapid and viperid snakes2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Venomous Animal Envenomation and Studies Open access
Cassandra Marie Modahl, Summer Xia Han, Jory van Thiel, Candida Vaz, Nathan L. Dunstan, Seth E. Frietze, +3 more
2citations -
Multi-omics profiling, in vitro and in vivo enhancer assays dissect the cis -regulatory mechanisms underlying North Carolina macular dystrophy, a retinal enhanceropathy2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Retinal Development and Disorders Open access
Stijn Van de Sompele, Kent W. Small, Munevver Burcu Cicekdal, Víctor López-Soriano, Eva D’haene, Fadi S. Shaya, +23 more
3citations -
GRAND: A database of gene regulatory network models across human conditions2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Camila M. Lopes‐Ramos, Deborah A. Weighill, Abhijeet R. Sonawane, Rebekka Burkholz, Behrouz Shamsaei, +4 more
8citations -
A lncRNA identifies IRF8 enhancer element in negative feedback control of dendritic cell differentiation2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Huaming Xu, Zhijian Li, Chao‐Chung Kuo, Katrin Götz, Thomas A. Look, Marcelo A. S. Toledo, +3 more
2citations -
The Brugada syndrome associated gene WT1 impacts on SCN5A expression and cardiac conduction2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cardiac electrophysiology and arrhythmias Open access
E. Madelief Marsman, Joost Allard Offerhaus, Thomas Stervinou, Leander Beekman, Simona Casini, T J Streef, +11 more
0citations -
Cross-species consensus atlas of the primate basal ganglia2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nelson Johansen, Yuanyuan Fu, Matthew T. Schmitz, Alma Dubuc, Niklas Kempynck, Morgan E. Wirthlin, +87 more
11citations -
Analysis of variants in untranslated and promoter regions and breast cancer risk using whole genome sequencing data2024 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Naomi Wilcox, Jonathan P. Tyrer, Leila Dorling, Joe Dennis, Marc Naven, Mustapha Abubakar, +47 more
1citations -
A discrete region of the D4Z4 is sufficient to initiate epigenetic silencing2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Ellen M. Paatela, Danielle C. Hamm, Sean R. Bennett, Taranjit S. Gujral, Silvère M. van der Maarel, Stephen J. Tapscott
0citations -
The Network Zoo: a multilingual package for the inference and analysis of biological networks2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Deborah A. Weighill, Rebekka Burkholz, +17 more
1citations -
Long noncoding RNAs emerge from transposon-derived antisense sequences and may contribute to infection stage-specific transposon regulation in a fungal phytopathogen2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Powdery Mildew Fungal Diseases Open access
Jiangzhao Qian, Heba M. M. Ibrahim, Myriam Erz, Florian Kümmel, Ralph Panstruga, Stefan Kusch
2citations -
Adaptive laboratory evolution restores solvent tolerance in plasmid-cured Pseudomonas putida S12; a molecular analysis2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Hadiastri Kusumawardhani, Benjamin Furtwängler, Matthijs Blommestijn, Adelė Kaltenytė, Jaap van der Poel, Jevan Kolk, +2 more
0citations -
Refining the transcriptional landscapes for distinct clades of virulent phages infecting pseudomonas aeruginosa2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Bacteriophages and microbial interactions Open access
Leena Putzeys, Laura Wicke, Maarten Boon, Vera van Noort, Jörg Vogel, Rob Lavigne
1citations -
Chronic exposure to low-concentration urban PM2.5 accelerates maladaptive repair after ischemic injury via mitochondrial dysfunction and lysosomal stress2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Acute Kidney Injury Research Open access
Peiqi Sun, Antônio Carlos Parra, Talita Rojas Sanches, Caroline Fernanda Hei Wikuats, Loes M. Butter, Nike Claessen, +15 more
0citations -
Asymmetric inter-kingdom gene transfer and a horizontal transposon invasion in a powdery mildew fungus2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Lee Mariault, Éric Lasserre, Jiangzhao Qian, Ji-Hun Hwang, Kyung Do Kim, Anaïs Gibert, +3 more
0citations -
The epigenetic reader MORC3 is required for T cell development in the thymus2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology
Veronica Della Chiara, Maja Vukić, Jihed Chouaref, Laura García-Pérez, Gita Naber, Kelly K. D. Vonk, +9 more
0citations -
Ste20-like kinase is critical for inhibitory synapse maintenance and its deficiency confers a developmental dendritopathy2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neuroscience and Neuropharmacology Research Open access
Susanne Schoch, Anne Quatraccioni, Barbara K. Robens, Robert Maresch, Karen M. J. van Loo, Thoralf Opitz, +5 more
1citations -
TRIM28 regulates pre-mRNA splicing via phosphorylation and SUMOylation networks2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Vigor Matković, Cristian Prieto‐Garcia, Thorsten Mosler, Paul W. Hotz, Felix Haidle, Joost Schimmel, +7 more
0citations