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A high-stringency blueprint of the human proteome2020 Nature Communications article Chemistry Advanced Proteomics Techniques and Applications Open access cited by 2 patents
Subash Adhikari, Edouard Collins Nice, Eric W. Deutsch, Lydie Lane, Gilbert S. Omenn, Stephen R. Pennington, +40 more
210citations -
Comparison of in-gel and in-solution proteolysis in the proteome profiling of organ perfusion solutions2023 Clinical Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access
Corinna Snashall, Chris W. Sutton, Maria Letizia Lo Faro, Carlo D. L. Ceresa, Rutger J. Ploeg, Sadr ul Shaheed
14citations -
Instrument–Software Synergy in Proteomics: Systematic Evaluation across Mass Spectrometry Platforms, Search Engines, and Rescoring Methods2026 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access
Sander Heyndrickx, Robbin Bouwmeester, Arthur Declercq, Robbe Devreese, Magnus Palmblad, Wout Bittremieux, +7 more
0citations -
Instrument-Software Synergy in Proteomics: Systematic Evaluation Across Mass Spectrometry Platforms, Search Engines, and Rescoring Methods2026 Zenodo (CERN European Organization for Nuclear Research) preprint Chemistry Advanced Proteomics Techniques and Applications Open access
Sander Heyndrickx, Ralf Gabriels, Robbin Bouwmeester, Robbe Devreese, Arthur Declercq, Lennart Martens, +7 more
0citations -
Instrument-Software Synergy in Proteomics: Systematic Evaluation Across Mass Spectrometry Platforms, Search Engines, and Rescoring Methods2026 Zenodo (CERN European Organization for Nuclear Research) preprint Chemistry Advanced Proteomics Techniques and Applications Open access
Sander Heyndrickx, Ralf Gabriels, Robbin Bouwmeester, Robbe Devreese, Arthur Declercq, Lennart Martens, +7 more
0citations -
Benchmarking of shotgun sequencing depth reveals the potential and limitations of shallow metagenomics and strain-level analysis2026 Nature Microbiology article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Nicole Simone Treichel, Charlie Pauvert, Joana Séneca, Petra Pjevac, David Berry, John Penders, +2 more
18citations -
Benchmarking of shotgun sequencing depth highlights limitations of strain-level analysis and shallow metagenomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Nicole Simone Treichel, Joana Séneca, Petra Pjevac, David Berry, John Penders
5citations -
P0957 Proteomic discordance with clinical and biochemical response filgotinib in Ulcerative Colitis suggests residual inflammatory signals2026 Journal of Crohn s and Colitis conference-abstract Biochemistry, Genetics and Molecular Biology Inflammatory Bowel Disease Open access
Jonas M. Louwers, Suzanne H. C. Veltkamp, Philip W. Voorneveld, Marjolijn Duijvestein, A E Van der Meulen - de Jong, Femke van Wijk, +1 more
0citations -
Extinct species identification from Upper Pleistocene bone fragments not identifiable from their osteomorphological studies by proteomics analysis2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Earth and Planetary Sciences Archaeology and ancient environmental studies Open access
Fabrice Bray, Stéphanie Flament, Grégory Abrams, Dominique Bonjean, Kévin Di Modica, Christian H. Rolando, +2 more
4citations -
Quantifying Positional Isomers (QPI) by Top-Down Mass Spectrometry2021 Molecular & Cellular Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access
Andrea M. Brunner, Philip Lössl, Paul P. Geurink, Huib Ovaa, Pascal Albanese, Maarten A. F. Altelaar, +2 more
7citations -
Archaeological preservation of amelogenesis pathways2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Forensic and Genetic Research Open access
Ragnheiður Diljá Ásmundsdóttir, Gaudry Troché, Jesper Velgaard Olsen, Marina Martínez de Pinillos, María Martinón‐Torres, Sarah A. Schrader, +1 more
1citations -
LAMPA, LArge Multidomain Protein Annotator, and its application to RNA virus polyproteins2020 Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Anastasia A. Gulyaeva, Andrey I Sigorskih, Elena S Ocheredko, Dmitry V. Samborskiy, Alexander E. Gorbalenya
14citations -
Variant mapping using mass spectrometry–based proteotyping as a diagnostic tool in von Willebrand disease2024 Journal of Thrombosis and Haemostasis article Medicine Platelet Disorders and Treatments Open access
Iris charlotte Kreft, Tirsa T van Duijl, Calvin B. van Kwawegen, Ferdows Atiq, Winny Phan, Margo B. P. Schuller, +8 more
11citations -
2019 Association of Biomolecular Resource Facilities Multi-Laboratory Data-Independent Acquisition Proteomics Study2023 Journal of Biomolecular Techniques JBT article Chemistry Advanced Proteomics Techniques and Applications Open access cited by 1 patent
Joanna M Kirkpatrick, Paul M. Stemmer, Brian C. Searle, Laura E. Herring, LeRoy B. Martin, Mukul Kumar Midha, +6 more
1citations -
Engineering Af1521 improves ADP-ribose binding and identification of ADP-ribosylated proteins2020 Nature Communications article Biochemistry, Genetics and Molecular Biology Biochemical and Structural Characterization Open access cited by 2 patents
Kathrin Nowak, Florian Rosenthal, T. Karlberg, Mareike Bütepage, A.G. Thorsell, Birgit Dreier, +8 more
90citations -
microSTRESSdb: a curated database for prioritizing bacteria alleviating plant abiotic stress2026 Microbiological Research article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
P. Nuijten, K. Bretscher, R. Cazorla, J.M. Raaijmakers, Guerrero Guillermo, A. Ossowicki, +1 more
0citations
22 results