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Development of an amplicon nanopore sequencing strategy for detection of mutations conferring intermediate resistance to vancomycin in Staphylococcus aureus strains2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Antimicrobial Resistance in Staphylococcus Open access
Abraham G Moller, Robert A. Petit, Michelle H. Davis, Timothy D. Read
0citations -
Mako: a graph-based pattern growth approach to detect complex structural variants2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomic variations and chromosomal abnormalities Open access
Jiadong Lin, Xiaofei Yang, Walter A. Kosters, Tun Xu, Yanyan Jia, Songbo Wang, +8 more
1citations -
Self-supervised deep learning for pan-cancer mutation prediction from histopathology2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science AI in cancer detection Open access
Oliver Lester Saldanha, Chiara Maria Lavinia Loeffler, Jan Niehues, Marko van Treeck, Tobias Paul Seraphin, Katherine Jane Hewitt, +5 more
10citations -
The future of artificial intelligence in digital pathology - results of a survey across stakeholder groups2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science AI in cancer detection Open access
Céline N. Heinz, Amelie Echle, Sebastian Foersch, Andrey Bychkov, Jakob Nikolas Kather
1citations -
Benchmarking artificial intelligence methods for end-to-end computational pathology2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science AI in cancer detection Open access
Narmin Ghaffari Laleh, Hannah Sophie Muti, Chiara Maria Lavinia Loeffler, Amelie Echle, Oliver Lester Saldanha, Faisal Mahmood, +17 more
15citations -
Swarm learning for decentralized artificial intelligence in cancer histopathology2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science AI in cancer detection Open access
Oliver Lester Saldanha, Philip Quirke, Nicholas Paul West, Jacqueline A. James, Maurice Bernard Loughrey, Heike Irmgard Grabsch, +20 more
22citations -
The Impact of Digital Histopathology Batch Effect on Deep Learning Model Accuracy and Bias2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science AI in cancer detection Open access
Frederick Matthew Howard, James M. Dolezal, Sara E. Kochanny, Jefree J. Schulte, Heather Chen, Lara Rosaline Heij, +7 more
25citations -
MUSICiAn: Genome-wide Identification of Genes Involved in DNA Repair via Control-Free Mutational Spectra Analysis2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Colm Seale, Marco Barazas, Robin van Schendel, Marcel Tijsterman, Joana P. Gonçalves
3citations -
Bone pain in Fibrous dysplasia does not rely on aberrant sensory nerve sprouting or neuroma formation2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Bone Tumor Diagnosis and Treatments Open access
Biagio Palmisano, Chiara Tavanti, Giorgia Farinacci, Giorgio Gosti, Marco Leonetti, Samantha Donsante, +5 more
3citations -
Deciphering conformational selectivity in the A 2A adenosine G protein-coupled receptor by Free Energy simulations2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Willem Jespers, Laura H. Heitman, Adriaan P. IJzerman, Eddy Sotelo, Gerard J. P. van Westen, Johan Åqvist, +1 more
1citations