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DNA metabarcoding quantifies the relative biomass of arthropod taxa in songbird diets: Validation with camera‐recorded diets2022 Ecology and Evolution article Environmental Science Environmental DNA in Biodiversity Studies Open access
Yvonne I. Verkuil, Marion Nicolaus, Richard Ubels, Maurine W. Dietz, Jelmer M. Samplonius, Annabet Galema, +3 more
57citations -
Metabarcoding read abundances of orchid mycorrhizal fungi are correlated to copy numbers estimated using ddPCR2023 New Phytologist article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access
Deyi Wang, Krijn Baptist Trimbos, Sofia I. F. Gomes, Hans Jacquemyn, Vincent S. F. T. Merckx
16citations -
Testing repeatability, testing repeatability, testing repeatability: harmonization of the DNA metabarcoding protocol for macrobenthos across Europe2021 ARPHA Conference Abstracts conference-paper Environmental Science Environmental DNA in Biodiversity Studies Open access
Laure Van den Bulcke, Annelies De Backer, Magdalini Christodoulou, Sahar Khodami, Sara Maes, Pedro Martínez Arbizu, +4 more
0citations -
Assessing the degradation of environmental DNA and RNA based on genomic origin in a metabarcoding context2023 Environmental DNA article Environmental Science Environmental DNA in Biodiversity Studies Open access
Kaushar Kagzi, Katie L. Millette, Joanne E. Littlefair, Xavier Pochon, Susanna A. Wood, Gregor F. Fussmann, +1 more
16citations -
DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review2021 Frontiers in Marine Science article Environmental Science Environmental DNA in Biodiversity Studies Open access
Romy Gielings, Maria Fais, Diego Fontaneto, Simon Creer, Filipe O. Costa, Willem Renema, +1 more
74citations -
MetaZooGene Intercalibration Experiment ( MZG ‐ ICE ): Metabarcoding Marine Zooplankton Diversity of the Global Ocean2025 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Leocadio Blanco‐Bercial, Jennifer M. Questel, Paola G. Batta‐Lona, Rubén Escribano, Tone Falkenhaug, Junya Hirai, +17 more
1citations -
DNA metabarcoding on repeat: Sequencing data of marine macrobenthos are reproducible and robust across labs and protocols2023 Ecological Indicators article Environmental Science Environmental DNA in Biodiversity Studies Open access
Laure Van den Bulcke, Annelies De Backer, Jan Wittoeck, Kevin K. Beentjes, Sara Maes, Magdalini Christodoulou, +6 more
16citations -
DNA metabarcoding successfully quantifies relative abundances of arthropod taxa in songbird diets: a validation study using camera-recorded diets2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Environmental DNA in Biodiversity Studies Open access
Yvonne I. Verkuil, Marion Nicolaus, Richard Ubels, Maurine W. Dietz, Jelmer M. Samplonius, Annabet Galema, +3 more
6citations -
Size-dependent impacts from polystyrene micro- and nanoplastics on freshwater invertebrates: A mesocosm study combining environmental DNA metabarcoding and morphological identification2025 Journal of Hazardous Materials article Environmental Science Microplastics and Plastic Pollution Open access
Martin van der Plas, Tom A.P. Nederstigt, Krijn Baptist Trimbos, Martina G. Vijver
4citations -
A Field‐Deployable eDNA Metabarcoding Workflow Including De Novo Reference Assembly for Characterising Understudied Biodiversity Hotspots2026 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Jesse Erens, Christopher Heine, Stefan Lötters, Henrik Krehenwinkel, Andrew J. Crawford, Luis Alberto Rueda‐Solano, +1 more
1citations -
The influence of intraspecific sequence variation during DNA metabarcoding: A case study of eleven fungal species2021 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Eva Lena F. Estensmo, Sundy Maurice, Luís Neves Morgado, Pedro Maria Martin-Sanchez, Inger Skrede, Håvard Kauserud
80citations -
Quantitative assessment of reef foraminifera community from metabarcoding data2024 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Elsa B. Girard, Emilie A. Didaskalou, Andi M. A. Pratama, Carolina Rattner, Raphaël Morard, Willem Renema
8citations -
DNA metabarcoding using nrITS2 provides highly qualitative and quantitative results for airborne pollen monitoring2021 The Science of The Total Environment article Environmental Science Environmental DNA in Biodiversity Studies Open access
Marcel Polling, Melati Sin, Letty A. de Weger, Arjen G. C. L. Speksnijder, Mieke M.J.F. Koenders, Hugo de Boer, +1 more
55citations -
Fungal metabarcoding data integration framework for the MycoDiversity DataBase (MDDB)2020 Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access
Irene Martorelli, Leon Helwerda, Jesse J. Kerkvliet, Sofia I. F. Gomes, Jorinde Nuytinck, Chivany R. A. van der Werff, +4 more
10citations -
eDNA-based approaches advance ecotoxicology: Insights and best practices from eDNA metabarcoding studies in evaluating stress-induced aquatic (macro-) invertebrate community composition2025 Ecological Indicators article Environmental Science Environmental DNA in Biodiversity Studies Open access
Martin van der Plas, Krijn Baptist Trimbos, Thijs Bosker, Martina G. Vijver
6citations -
Insights from a Long-Term Outdoor Mesocosm Study: eDNA Metabarcoding Reveals Exacerbated but Transient Impacts from a Nanoenabled Pesticide Formulation (Nano-TiO 2 -Coated Carbendazim) on Freshwater Microbial Communities2025 ACS ES&T Water article Environmental Science Pesticide and Herbicide Environmental Studies Open access
Martin van der Plas, Tom A.P. Nederstigt, Krijn Baptist Trimbos, Emilie A. Didaskalou, Martina G. Vijver
1citations -
Simplified, Portable and Cost‐Efficient Airborne eDNA Metabarcoding to Expand Tropical Biodiversity Assessments2026 Environmental DNA article Environmental Science Environmental DNA in Biodiversity Studies Open access
Christopher Heine, Jesse Erens, Lukas Reese, Henrik Krehenwinkel, Claudia Lansac, Stefan Lötters, +1 more
0citations -
Consensus calling of MinION amplicon reads improves metabarcoding results2020 Zenodo (CERN European Organization for Nuclear Research) dataset Environmental Science Environmental DNA in Biodiversity Studies Open access
Heleen Bouwer, Arjen G. C. L. Speksnijder, Rutger Aldo Vos, Elza J. Duijm
0citations