Not finding it? Sign in to also search OpenAlex live.
-
A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing2021 Genome Research preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Brian D. Aevermann, Yun Zhang, Mark A. Novotny, Mohamed Keshk, Trygve E. Bakken, Jeremy A. Miller, +4 more
96citations -
NS-Forest: A machine learning method for the objective identification of minimum marker gene combinations for cell type determination from single cell RNA sequencing2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Brian D. Aevermann, Yun Zhang, Mark A. Novotny, Trygve E. Bakken, Jeremy A. Miller, Rebecca D. Hodge, +3 more
12citations -
Integrating Gene Expression Analysis and Ecophysiological Responses to Water Deficit in Leaves of Tomato Plants2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Stress Responses and Tolerance Open access
Giovanni Bortolami, Tobias de Werk, Maximilian Larter, Ajaree Thonglim, Bernd Mueller‐Roeber, Salma Balazadeh, +1 more
1citations -
Marker and readout genes for priming in the Arabidopsis – Pseudomonas cannabina pv. alisalensis interaction2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Andrea J. Sistenich, Lisa Fürtauer, Franziska Scheele, Uwe Conrath
0citations -
Identification of endothelial-to-mesenchymal transition gene signatures in single-cell transcriptomics of human atherosclerotic tissue2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Lotte Slenders, Marian Wesseling, Arjan Boltjes, Daniek Kapteijn, Marie A.C. Depuydt, Koen H.M. Prange, +8 more
6citations -
High sorbic acid resistance of Penicillium roqueforti is mediated by the SORBUS gene cluster2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Fungal and yeast genetics research Open access
Maarten Punt, Sjoerd J. Seekles, Jisca L. van Dam, Connor de Adelhart Toorop, Raithel R. Martina, Jos A. M. P. Houbraken, +3 more
2citations -
WWP2 osteoarthritis risk allele rs1052429-A confers risk by affecting cartilage matrix deposition via hypoxia associated genes2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Osteoarthritis Treatment and Mechanisms Open access
Margo Tuerlings, George M. C. Janssen, Ilja Boone, Marcella van Hoolwerff, Alejandro Rodríguez Ruiz, Evelyn Houtman, +7 more
1citations -
Hyper-physiologic mechanical cues, as an osteoarthritis disease relevant environmental perturbation, cause a critical shift in set-points of methylation at transcriptionally active CpG sites in neo-cartilage organoids
Niek G.C. Bloks, Amanda R. Dicks, Zainab Harissa, Rob G. H. H. Nelissen, Ghazaleh Hajmousa, Y.F. Ramos, +3 more
1citations -
Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Junedh Amrute, In‐Hyuk Jung, Tracy Yamawaki, Andrea L. Bredemeyer, Johanna Diekmann, Sikander Hayat, +28 more
5citations -
The NLRP1 inflammasome emerges as a promising therapeutic target and prognostic biomarker across multiple cancer types: A comprehensive pan-cancer analysis2024 Research Square preprint Biochemistry, Genetics and Molecular Biology Inflammasome and immune disorders Open access
Leila Habibipour, Mahboubeh Sadeghi, Alireza Raghibi, Amirhossein Mohajeri Khorasani, Pegah Mousavi, Nima Sanadgol
0citations -
Plant PhysioSpace: a robust tool to compare stress response across plant species2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Ali Hadizadeh Esfahani, Janina Maß, Asis Hallab, Bernhard Schuldt, David Nevarez, Björn Usadel, +3 more
1citations -
Infiltrative classical monocyte-derived and SPP1 lipid-associated macrophages mediate inflammation and fibrosis in ANCA-associated glomerulonephritis2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Vasculitis and related conditions Open access
Yosta Vegting, Aldo Jongejan, Annette E. Neele, Nike Claessen, Gal Sela, Koen H.M. Prange, +10 more
2citations -
KIF23 regulation by miR-107 controls replicative tumor cell fitness in mouse and human hepatocellular carcinoma2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology MicroRNA in disease regulation Open access
Sanchari Roy, Carolin Lohr, Rossella Pellegrino, Mihael Vucur, Michael T. Singer, Veronika Buettner, +7 more
0citations -
RFX3 is essential for the development and maturation of human pancreatic islets derived from pluripotent stem cells2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic function and diabetes Open access
Bushra Memon, Noura Aldous, Ahmed K. Elsayed, Sadaf Ijaz, Sikander Hayat, Essam Mohamed Abdelalim
0citations -
Mycobacterium leprae and host immune transcriptomic signatures for reactional states in leprosy2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Leprosy Research and Treatment Open access
Madhusmita Das, Diana David, Ilse Horo, Anouk van Hooij, Maria Tió Coma, Annemieke Geluk, +1 more
0citations -
Dissection of N -, O - and glycosphingolipid glycosylation changes in PaTu-S pancreatic adenocarcinoma cells upon TGF-β challenge2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Jing Zhang, Zejian Zhang, Stephanie Holst, Constantin Blöchl, Katarina Madunić, Manfred Wuhrer, +2 more
0citations -
Tsc1 haploinsufficiency leads to Pax2 dysregulation in the developing murine cerebellum2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Tuberous Sclerosis Complex Research Open access
Ines Serra, Ana Stravs, Catarina Osório, Maria Roa Oyaga, Martijn Schonewille, Christian Tudorache, +1 more
0citations