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The Influence of Human Annotation on CNN Performance for Anomaly Detection in ICU Data2025 Current Directions in Biomedical Engineering article Computer Science Anomaly Detection Techniques and Applications Open access
Lavinia Goldermann, Simon Fonck, Lena Olivier, Sebastian Johannes Fritsch, André Stollenwerk
0citations -
TEtrimmer: a tool to automate the manual curation of transposable elements2025 Nature Communications article Biochemistry, Genetics and Molecular Biology Chromosomal and Genetic Variations Open access
Jiangzhao Qian, Hang Xue, Shujun Ou, Ludwig Mann, Jessica M. Storer, Lisa Fürtauer, +4 more
29citations -
The Influence of Human Annotation on CNN Performance for Anomaly Detection in ICU Data2025 Current Directions in Biomedical Engineering article Computer Science Anomaly Detection Techniques and Applications Open access
Lavinia Goldermann, Simon Fonck, Lena Sophie Olivier, Sebastian Johannes Fritsch, André Stollenwerk
0citations -
A configurable software platform for creating, reviewing and adjudicating annotation of unstructured text.2022 International Journal for Population Data Science article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Richard J Beare, Tanya Ravipati, Elizabeth Le, Taya Annabelle Collyer, Velandai K. Srikanth, Nadine E. Andrew
0citations -
SwarmMAP: swarm learning for decentralized cell type annotation in single cell sequencing data2026 npj Systems Biology and Applications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Fu Zhu, Rafael Kramann, Sikander Hayat, +1 more
2citations -
Cooperative AI training for cardiothoracic segmentation in computed tomography: An iterative multi-center annotation approach2024 European Journal of Radiology article Computer Science Medical Image Segmentation Techniques Open access
Bianca C Lassen-Schmidt, Bettina Baeßler, Matthias Gutberlet, Josephine Berger, Jan Michael Brendel, Andreas Michael Bucher, +17 more
4citations -
Semantic Annotation of Experimental Methods in Analytical Chemistry2022 Analytical Chemistry article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Magnus Palmblad, Enahoro Asein, Nina P. Bergman, A. P. Ivanova, Lukas Ramasauskas, Hazzar Mohammed Reyes, +3 more
3citations -
Towards a resource for multilingual lexicons: an MT assisted and human-in-the-loop multilingual parallel corpus with multi-word expression annotation2026 Language Resources and Evaluation article Computer Science Natural Language Processing Techniques Open access
Lifeng Han, Najet Hadj Mohamed, Malak Rassem, Gareth J. F. Jones, Alan F. Smeaton, Goran Nenadić
1citations -
Accuracy of Manual Intracranial Pressure Recording Compared to a Computerized High-Resolution System: A CENTER-TBI Analysis2023 Neurocritical Care article Medicine Traumatic Brain Injury and Neurovascular Disturbances Open access
Tommaso Zoerle, Tatiana Birg, Marco Carbonara, Peter Smielewski, Michał M. Placek, Elisa Roncati Zanier, +46 more
9citations -
Feasibility of a German High-Frequency Neonatal and Pediatric Intensive Care Dataset (AIx-Neo-Guard Dataset): Secondary Data Cohort Study2026 JMIR Pediatrics and Parenting article Medicine Healthcare Technology and Patient Monitoring Open access
Lena Sophie Olivier, Camelia Lauterbach Oprea, André Stollenwerk, Thorsten W Orlikowsky, Mark Schoberer
2citations -
Cyto R-CNN and CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images2024 Computer Methods and Programs in Biomedicine article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Johannes Raufeisen, Kunpeng Xie, Fabian Hörst, Till A. Braunschweig, Jianning Li, Jens Kleesiek, +6 more
11citations -
Denoising diffusion probabilistic models for generation of realistic fully-annotated microscopy image datasets2024 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Dennis Eschweiler, Rüveyda Yilmaz, Matisse Baumann, Ina Laube, Rijo Roy, Abin Jose, +2 more
33citations -
Deep learning segmentation model for quantification of infarct size in pigs with myocardial ischemia/reperfusion2024 Basic Research in Cardiology article Computer Science Medical Image Segmentation Techniques Open access
Felix Braczko, Andreas Skyschally, Helmut Raphael Lieder, Jakob Nikolas Kather, Petra Kleinbongard, Gerd Heusch
2citations -
Superpixel segmentations for thin sections: Evaluation of methods to enable the generation of machine learning training data sets2022 Computers & Geosciences article Computer Science Advanced Neural Network Applications Open access
Jiaxin Yu, Florian Wellmann, Simon Virgo, Marven von Domarus, Mingze Jiang, Joyce Schmatz, +1 more
30citations -
On distinguishing between canonical tRNA genes and tRNA gene fragments in prokaryotes2023 RNA Biology article Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access
Peter T. S. van der Gulik, Martijn Egas, Ken Kraaijeveld, Nina Dombrowski, Astrid T. Groot, Anja Spang, +2 more
3citations -
Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering2026 Nature Methods article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jieran Sun, Kirti Biharie, Peiying Cai, Niklas Müller‐Bötticher, Paul Kießling, Meghan A. Turner, +47 more
9citations