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Abstract 6669: Spatially resolved multiplex immunofluorescence profiling of antibody-drug conjugate targets in bladder cancer using an AI-powered end-to-end workflow2026 Cancer Research conference-abstract Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Christoph Kuppe, Markus Eckstein, Katharina Dornblut, Niklas Klümper, Fabian Schneider, Moritz Widmaier, +1 more
0citations -
The IBEX knowledge-base a community resource enabling adoption and development of immunofluorescence imaging methods2025 eLife preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +55 more
2citations -
Super-Resolution Imaging of the A- and B-Type Lamin Networks: A Comparative Study of Different Fluorescence Labeling Procedures2021 International Journal of Molecular Sciences article Biochemistry, Genetics and Molecular Biology Nuclear Structure and Function Open access
Merel Stiekema, Frans C. S. Ramaekers, Dimitrios Kapsokalyvas, Marc A. M. J. van Zandvoort, Rogier J. A. Veltrop, Jos L. V. Broers
21citations -
The IBEX Imaging Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluoresence Imaging Methods2025 eLife preprint Biochemistry, Genetics and Molecular Biology Genetics, Bioinformatics, and Biomedical Research Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +55 more
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Thrombotic Microangiopathy in the Renal Allograft: Results of the TMA Banff Working Group Consensus on Pathologic Diagnostic Criteria2023 Transplant International article Medicine Renal Transplantation Outcomes and Treatments Open access
Marjan Afrouzian, Nicolas Kozakowski, Helen Liapis, Verena Broecker, Carmen Ávila-Casado, Heinz M. Regele, +20 more
20citations -
Deep learning-based molecular morphometrics for kidney biopsies2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Renal Diseases and Glomerulopathies Open access
Marina Zimmermann, Martin Klaus, Milagros N. Wong, Ann-Katrin Thebille, Lukas Gernhold, Christoph Kuppe, +13 more
6citations -
Cathepsin D and G expression correlates with human fracture healing phases and specific neutrophil N1 and N2 phenotypes2025 Bone article Immunology and Microbiology Neutrophil, Myeloperoxidase and Oxidative Mechanisms Open access
Fangzhou Lu, Rald V. M. Groven, Dennis M. Meesters, Albert V. Bitorina, Martijn Poeze, Martijn van Griensven, +2 more
4citations -
PD1+ T-cells correlate with Nerve Fiber Density as a prognostic biomarker in patients with resected perihilar cholangiocarcinoma2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cholangiocarcinoma and Gallbladder Cancer Studies Open access
Xiuxiang Tan, Mika Rosin, Simone Appinger, Jan Bednarsch, Dong Liu, Georg J. Wiltberger, +19 more
1citations -
Integrating multiplex immunofluorescent and mass spectrometry imaging to map myeloid heterogeneity in its metabolic and cellular context2022 Cell Metabolism article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Pieter Goossens, Chang Wei Lu, Jianhua Cao, Marion J. Gijbels, Joël Karel, Erwin Wijnands, +11 more
56citations -
Anti-DNA-IgM Favors the Detection of NET-Associated Extracellular DNA2023 International Journal of Molecular Sciences article Immunology and Microbiology Neutrophil, Myeloperoxidase and Oxidative Mechanisms Open access
Han Wang, Antonia Margarethe Stehr, Jeeshan Singh, Leticija Zlatar, Arndt Hartmann, Katja Evert, +7 more
4citations -
Deep Learning-Based Bias Transfer for Overcoming Laboratory Differences of Microscopic Images2021 Lecture notes in computer science conference-paper Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Ann-Katrin Thebille, Esther Dietrich, Martin Klaus, Lukas Gernhold, Maximilian Lennartz, Christoph Kuppe, +6 more
1citations -
004 3D skin models as in vitro diagnostics for the detection of autoimmune bullous dermatoses2024 Journal of Investigative Dermatology article Medicine Autoimmune Bullous Skin Diseases Open access
Sebastian Huth, S. Küppers, Ruth Heise, Yvonne Marquardt, David Kluwig, M. Schmidt, +6 more
0citations