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Cyto R-CNN and CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images2024 Computer Methods and Programs in Biomedicine article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Johannes Raufeisen, Kunpeng Xie, Fabian Hörst, Till A. Braunschweig, Jianning Li, Jens Kleesiek, +6 more
11citations -
On the benchmarking of clustering algorithms and hyperparameter influence for cell type detection in single-cell RNA sequencing data2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Aleksandra Szmigiel, Ivan G. Costa, Ricardo J. G. B. Campello
2citations -
Semantic Annotation of Experimental Methods in Analytical Chemistry2022 Analytical Chemistry article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Magnus Palmblad, Enahoro Asein, Nina P. Bergman, A. P. Ivanova, Lukas Ramasauskas, Hazzar Mohammed Reyes, +3 more
3citations -
Clinical Application of Deep Learning for Spine MRI Interpretation: A Multicenter Evaluation of Artificial-Intelligence-Assisted versus Manual Reading on Diagnostic Agreement with the Reference Standard
Xing Cheng, Maoping Zhang, Zhenxiao Ren, Tang Tang, Xiaolin Meng, Zhong Huang, +15 more
4citations -
DiBiMT : A Gold Evaluation Benchmark for Studying Lexical Ambiguity in Machine Translation2024 Computational Linguistics article Computer Science Natural Language Processing Techniques Open access
Federico Martelli, Stefano Parrella, Niccolò Campolungo, Tina Munda, Svetla Koeva, Carole Tiberius, +1 more
2citations -
Benchmarking short-range machine learning potentials for atomistic simulations of metal/electrolyte interfaces2026 arXiv (Cornell University) preprint Materials Science Machine Learning in Materials Science Open access
Lucas B. T. de Kam, Jiaxin Zhu, Ankit Mathanker, Katharina Doblhoff-Dier, Nitish Govindarajan
1citations -
POS0535 QUERY ALGORITHMS AND MACHINE LEARNING METHODS AS TOOLS TO IDENTIFY COMORBIDITIES IN LARGE-SCALE FREE-TEXT BASED FIELDS: A CASE-REPORT2021 Annals of the Rheumatic Diseases conference-abstract Computer Science Machine Learning in Healthcare Open access
Dieter Roehrich, T. Maarseveen, Alfons A den Broeder, Călin D. Popa, Rachel Knevel
0citations -
Deep learning image enhancement algorithms in PET/CT imaging: a phantom and sarcoma patient radiomic evaluation2025 European Journal of Nuclear Medicine and Molecular Imaging article Medicine Radiomics and Machine Learning in Medical Imaging Open access
Lara M. Bonney, Gijsbert M. Kalisvaart, Floris H. P. van Velden, Kevin Martin Bradley, Andrew Bassim Hassan, Willem Grootjans, +1 more
8citations -
Identifying signs and symptoms of AL amyloidosis in electronic health records using natural language processing, diagnosis codes, and manually abstracted registry data2023 American Journal of Hematology article Biochemistry, Genetics and Molecular Biology Amyloidosis: Diagnosis, Treatment, Outcomes Open access
Eli Silvert, Laura Hester, Eshwan Ramudu, Colin Pawlowski, Britte Kranenburg, Francis K. Buadi, +7 more
5citations -
Application of convex hull analysis for the evaluation of data heterogeneity between patient populations of different origin and implications of hospital bias in downstream machine-learning-based data processing: A comparison of 4 critical-care patient datasets
Konstantin Sharafutdinov, Jayesh Sudhir Bhat, Sebastian Johannes Fritsch, Kateryna Nikulina, Moein E. Samadi, Richard Polzin, +4 more
12citations -
What do we really know about the interplay between brain, behavior, and cognition from childhood to early adulthood? An international group effort to generate and share simulated datasets.
Neda Sadeghi, Isabelle F. van der Velpen, Bradley T. Baker, Ishaan Batta, Sarah Genon, Ethan Michael McCormick, +19 more
0citations -
Intraoperative classification of CNS lymphoma and glioblastoma by AI-based analysis of Stimulated Raman Histology (SRH)2025 Brain and Spine article Biochemistry, Genetics and Molecular Biology Spectroscopy Techniques in Biomedical and Chemical Research Open access
Pierre Scheffler, Jakob Straehle, Amir El Rahal, Daniel Erny, Boris Mizaikoff, Ioannis Vasilikos, +10 more
12citations -
Performance of five metagenomic classifiers for virus pathogen detection using respiratory samples from a clinical cohort2022 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ellen C. Carbo, Igor A. Sidorov, Anneloes L. van Rijn-Klink, Sander van Boheemen, Hailiang Mei, Pieter Sicco Hiemstra, +4 more
4citations -
Reducing administrative burden in cardio-oncology: an LLM-powered approach for automated summarization of oncology and cardiotoxicity histories in dutch medical records2025 European Heart Journal Supplements article Medicine Artificial Intelligence in Healthcare and Education Open access
Julius Cornelis Heemelaar, Meena Fatah, Cees J.J. Westermann, Marieke Meija van Buchem, J. Wouter Jukema, M. Louisa Antoni
1citations -
Preserving fairness and diagnostic accuracy in private large-scale AI models for medical imaging2024 Communications Medicine article Computer Science Privacy-Preserving Technologies in Data Open access
Soroosh Tayebi Arasteh, Alexander Ziller, Christiane Katharina Kuhl, Marcus R. Makowski, Sven Nebelung, Rickmer Braren, +3 more
52citations