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Organellar data sets confirm overall angiosperm relationships if problematic RNA-edit sites are accounted for in mitochondrial genomes2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Diversity and Evolution Open access
Wesley K. Gerelle, Matthias Jost, Isabel Marques, D. H. Les, Rodrigo Vallejos, Stefan A. Little, +11 more
0citations -
Accurate characterization of CRISPR-Cas9 genome editing outcomes and mosaicism with near-perfect long reads2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Ida Höijer, Robin van Schendel, Anastasia Emmanouilidou, Rebecka Östlund, Ignas Bunikis, Marcel Tijsterman, +2 more
1citations -
CRISPR-Cas9 induces large structural variants at on-target and off-target sites in vivo that segregate across generations2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Ida Höijer, Anastasia Emmanouilidou, Rebecka Östlund, Robin van Schendel, Selma Bozorgpana, Lars Feuk, +3 more
0citations -
CRISPR/Cas with ribonucleoprotein complexes and transiently selected telomere vectors allows highly efficient marker-free and multiple genome editing in Botrytis cinerea2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Thomas Leisen, Fabian Bietz, Alex Wegner, Ulrich Schaffrath, David Scheuring, Felix Willmund, +3 more
18citations -
Epigenetic editing at individual age-associated CpGs affects the genome-wide epigenetic aging landscape2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Sven Liesenfelder, Mohamed H. Elsafi Mabrouk, Jessica Iliescu, Monica Varona Baranda, Athanasia Mizi, Martina Wessiepe, +2 more
5citations -
T cell correction pipeline for Inborn Errors of Immunity2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Katariina Mamia, Solrun Kolbeinsdottir, Zhuokun Li, Kornel Labun, Anna Zofia Komisarczuk, Salla Keskitalo, +22 more
1citations -
Smarter edits? Post-editing with error highlights and translation suggestions2026 arXiv (Cornell University) preprint Computer Science Natural Language Processing Techniques Open access
Fleur V. J. van Tellingen, Gautam Ranka, Dora Žugčić, Joyce van der Wal, Andrea Camasta, Livio Guerra, +1 more
0citations -
Fast and efficient generation of knock-in human organoids using homology-independent CRISPR/Cas9 precision genome editing2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access cited by 15 patents
Benedetta Artegiani, Delilah F. G. Hendriks, Joep Beumer, Rutger N.U. Kok, Xuan Zheng, Indi P. Joore, +4 more
29citations -
plantR: An R package and workflow for managing species records from biological collections2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Research Data Management Practices Open access
Renato A. Ferreira de Lima, Andrea Sánchez‐Tapia, Sara Ribeiro Mortara, Hans ter Steege, Marinez Ferreira de Siqueira
10citations -
Allosteric control of Ubp6 and the proteasome via a bidirectional switch2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Ubiquitin and proteasome pathways Open access
Ka Ying Sharon Hung, Sven Klumpe, Markus R. Eisele, Suzanne Elsasser, Geng Tian, Shuangwu Sun, +13 more
5citations -
Shockwave-induced DNA-free genome editing in tobacco: targeting the actin depolymerizing factor gene increases drought and salinity tolerance2020 preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Sruthy Maria Augustine, Anoop Vadakan Cherian, Kerstin Seiling, Nicole P. G. Raven, Ulrich Commandeur, Stefan Schillberg
0citations -
Modulating CRISPR-Cas genome editing using guide-complementary DNA oligonucleotides2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Thomas Swartjes, Peng Shang, Dennis J. van den Berg, Tim Künne, Niels Geijsen, Stan J. J. Brouns, +3 more
0citations