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Dataset on Temperature Dependency of Zebrafish Early Development2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Zebrafish Biomedical Research Applications Open access
Katja Schröder, Knut Braun, Caitlin Steindorf, Richard Ottermanns, Martina Roß‐Nickoll, Thomas Backhaus
1citations -
Total Error Sheets for Datasets (TES-D) -- A Critical Guide to Documenting Online Platform Datasets2023 arXiv (Cornell University) preprint Computer Science Research Data Management Practices Open access
Leon Fröhling, Indira Sen, Felix Soldner, Leonie Steinbrinker, Maria Zens, Katrin Weller
2citations -
FROG Analysis Ensures the Reproducibility of Genome Scale Metabolic Models2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Karthik Raman, Miroslav Kratochvíl, Brett G. Olivier, Matthias König, Pratyay Sengupta, Dinesh Kumar Kuppa Baskaran, +85 more
11citations -
DeepMed: A unified, modular pipeline for end-to-end deep learning in computational pathology2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science AI in cancer detection Open access
Marko van Treeck, Didem Çifçi, Narmin Ghaffari Laleh, Oliver Lester Saldanha, Chiara Maria Lavinia Loeffler, Katherine Jane Hewitt, +9 more
13citations -
WALDO: community-Wide Annotation of γδ Lymphocytes in single-cell Data, Openly benchmarked2026 Zenodo (CERN European Organization for Nuclear Research) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Farid Keramati, Moosa Rezwani, Likai Tan, David Hamilton, Zheng Song, Tao Yang, +10 more
0citations -
Retrieval for Extremely Long Queries and Documents with RPRS: a Highly Efficient and Effective Transformer-based Re-Ranker2023 arXiv (Cornell University) preprint Computer Science Information Retrieval and Search Behavior Open access
Arian Askari, Suzan Verberne, Amin Abolghasemi, Wessel Kraaij, Gabriella Pasi
1citations -
SynCom101: A web-based platform for the standardized design of functionally tailored synthetic microbial communities2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health
Jiayi Jing, Siemen Rockx, Aster Liu, Chrats Melkonian, Jos M. Raaijmakers, Paolina Garbeva, +1 more
0citations -
The FAIR Data Point Populator: collaborative FAIRification and population of FAIR Data Points2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Research Data Management Practices Open access
Daphne Wijnbergen, Rajaram Kaliyaperumal, Luiz Olavo Bonino da Silva Santos, Barend Mons, Marco Roos, Eleni Mina
0citations