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Comparison of the performance of two targeted metagenomic virus capture probe-based methods using synthetic viral sequences and clinical samples2023 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Kees Mourik, Igor A. Sidorov, Ellen C. Carbo, David van der Meer, Arnoud Boot, Aloys C.M. Kroes, +3 more
4citations -
Performance of five metagenomic classifiers for virus pathogen detection using respiratory samples from a clinical cohort2022 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ellen C. Carbo, Igor A. Sidorov, Anneloes L. van Rijn-Klink, Sander van Boheemen, Hailiang Mei, Pieter Sicco Hiemstra, +4 more
4citations -
Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples2021 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Jutte J.C. de Vries, Julianne Rose Brown, Nicole Fischer, Igor A. Sidorov, Sofia Morfopoulou, Jiabin Huang, +24 more
2citations -
Large scale serum proteomics identifies proteins associated with performance decline and clinical milestones in Duchenne muscular dystrophy2024 medRxiv preprint Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
N.A. Ikelaar, A. M. Barnard, S.W.M. Eng, S. Hosseini Vajargah, K.C.H. Ha, Hermien E. Kan, +4 more
2citations -
FLAG-X: Hybrid machine learning workflows for automated gating of clinical flow cytometry data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Paul Martini, Marziyeh Mohammadi, Michael Christoph Thrun, David B. Blumenthal, Stefan W. Krause
0citations -
Allele-specific digital PCR enhances precision and sensitivity in the detection and quantification of copy number alterations in heterogeneous DNA samples: an in silico and in vitro validation study2023 medRxiv preprint Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Rogier J. Nell, Mieke Versluis, Willem H. Zoutman, Gregorius P. M. Luyten, Martine Johanna Jager, Pieter A. van der Velden
5citations -
Machine learning approach identifies miRNA signatures for breast cancer detection and classification from patient urine samples2024 Research Square preprint Biochemistry, Genetics and Molecular Biology MicroRNA in disease regulation Open access
Jochen Maurer, Matthias Rübner, Chao‐Chung Kuo, Birgit Klein, Julia Franzen, Julia Wittenborn, +4 more
1citations -
Metabolic predictors of phenotypic traits can replace and complement measured clinical variables in transcriptome-wide association studies2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Anna Niehues, Daniele Bizzarri, Marcel J. T. Reinders, P. Eline Slagboom, Alain J. van Gool, Erik B. van den Akker, +1 more
0citations