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An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community2021 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access
Pallab Bhowmick, Simon Roome, Christoph H. Borchers, David R. Goodlett, Yassene Mohammed
23citations -
Genolator enables protein function interpretation using a multimodal large language model fusing genomic and structural interpretation with natural language interaction2026 Genome biology article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Martin Danner, Tanhim Islam, Matthias Begemann, Florian Kraft, Miriam Elbracht, Ingo Kurth, +1 more
0citations -
Metadata harmonization–Standards are the key for a better usage of omics data for integrative microbiome analysis2022 Environmental Microbiome article Computer Science Research Data Management Practices Open access
Tomislav Cernava, Daria Rybakova, François Buscot, Thomas Clavel, Alice Carolyn McHardy, Fernando Meyer, +45 more
59citations -
What is the Status of Global Digitisation? MIDS as an Institutional and Global Digitisation Standard2025 Biodiversity Information Science and Standards article Computer Science Research Data Management Practices Open access
Elspeth Haston, Cat Chapman, Ben Norton, Stefan Seifert, Sam Leeflang, Wouter Addink, +1 more
0citations -
A thorough analysis of the contribution of experimental, derived and sequence-based predicted protein-protein interactions for functional annotation of proteins2020 PLoS ONE article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Stavros Makrodimitris, Marcel J. T. Reinders, Roeland C. H. J. van Ham
4citations -
Mapping across Standards to Calculate the MIDS Level of Digitisation of Natural Science Collections2023 Biodiversity Information Science and Standards article Computer Science Research Data Management Practices Open access
Elspeth Haston, Mathias Dillen, Sam Leeflang, Wouter Addink, Claus Weiland, Dagmar Triebel, +5 more
1citations -
GeneSurfer enables transcriptome-wide exploration and annotation of gene co-expression modules in 3D spatial transcriptomics data2025 iScience article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Chang Li, Julian Thijssen, Thomas Kroes, Ximaine R. van der Burg, Louise van der Weerd, Thomas Höllt, +1 more
0citations -
Activity recognition using wearable sensors for tracking the elderly2020 User Modeling and User-Adapted Interaction article Computer Science Context-Aware Activity Recognition Systems Open access
Stylianos Paraschiakos, Ricardo Cachucho, Matthijs Moed, Diana van Heemst, Simon P. Mooijaart, P. Eline Slagboom, +2 more
60citations -
Human and murine fibroblast single-cell transcriptomics reveals fibroblast clusters are differentially affected by ageing and serum cholesterol2023 Cardiovascular Research article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Kim van Kuijk, Ian R McCracken, Renée J. H. A. Tillie, S. Asselberghs, Dlzar Ali Kheder, Stan Muitjens, +22 more
48citations -
Interactions between the Parasite Philasterides dicentrarchi and the Immune System of the Turbot Scophthalmus maximus. A Transcriptomic Analysis2020 Biology article Immunology and Microbiology Aquaculture disease management and microbiota Open access
A. Valle, José Manuel Leiro, Patricia Pereiro, Antonio J. Figueras, Beatriz Novoa, Ron P. Dirks, +1 more
17citations -
Comparison of in-gel and in-solution proteolysis in the proteome profiling of organ perfusion solutions2023 Clinical Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access
Corinna Snashall, Chris W. Sutton, Maria Letizia Lo Faro, Carlo D. L. Ceresa, Rutger J. Ploeg, Sadr ul Shaheed
14citations -
FOXG1 targets BMP repressors and cell cycle inhibitors in human neural progenitor cells2023 Human Molecular Genetics article Neuroscience Neurogenesis and neuroplasticity mechanisms Open access
Nuwan C. Hettige, Amelia Semenak, Xin Zhang, Huashan Peng, Marc-Daniel Hagel, Jean‐François Théroux, +8 more
12citations -
Mechanism Research of Chonglou as a Pain Killer by Network Pharmacology2021 World Journal of Traditional Chinese Medicine article Computer Science Computational Drug Discovery Methods Open access
Yu‐Tong Liu, Yongli Situ, Tingting Zhao, Hekun Zeng, Shang-Dong Liang, Günther Schmalzing, +4 more
10citations