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De-identifying Clinical Texts using Biomed-Clinical BERTs and Comprehensive Risk Assessment2025 IEEE International Conference on Healthcare Informatics (ICHI) conference-paper Computer Science Privacy-Preserving Technologies in Data Open access
Dhivin Shaji, Lifeng Han, Warren Del-Pinto, Goran Nenadić, Suzan Verberne
1citations -
Toward Assay-Aware Bioactivity Model(er)s: Getting a Grip on Biological Context2025 Journal of Chemical Information and Modeling article Computer Science Computational Drug Discovery Methods Open access
Linde Schoenmaker, Enzo G. Sastrokarijo, Laura H. Heitman, Joost B. Beltman, Willem Jespers, Gerard J. P. van Westen
21citations -
From Large Language Models to Knowledge Graphs for Biomarker Discovery in Cancer2023 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Md. Rezaul Karim, Lina Molinas Comet, Md Shajalal, Oya Beyan, Dietrich Rebholz‐Schuhmann, Stefan Decker
3citations -
PCAM: proteochemometric assay-aware modeling for robust bioactivity estimation and uncertainty quantification2026 Journal of Cheminformatics article Computer Science Computational Drug Discovery Methods Open access
Bola Khalil, David Alencar Araripe, Linde Schoenmaker, Natalia Dyubankova, Herman van Vlijmen, Gerard J. P. van Westen
0citations -
A Biomedical Knowledge Graph for Biomarker Discovery in Cancer2023 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Md. Rezaul Karim, Lina Molinas Comet, Oya Beyan, Dietrich Rebholz‐Schuhmann, Stefan Decker
0citations
13 results