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SMAD2: Regulatory junction of TGF-β and antigen signaling in mast cells2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology TGF-β signaling in diseases Open access
Gina Bronneberg, Steffen K. Meurer, Marlies Kauffmann, Chao‐Chung Kuo, Christian Liedtke, Ralf Weiskirchen, +1 more
1citations -
Identification and Characterization of Neoplastic Cells in Keratin-Positive Giant Cell-Rich Tumors2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Sarcoma Diagnosis and Treatment Open access
Maarten van der Linde, John S.A. Chrisinger, Elizabeth G. Demicco, Carina Anja Dehner, Gregory W. Charville, Inge H. Briaire‐de Bruijn, +6 more
1citations -
Integrative single-cell and genetic profiling of human heart failure identifies targets for cardiomyocyte restoration2025 medRxiv preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tore Bleckwehl, David Schumacher, Charlotte Heymanns, Sidrah Maryam, Sean Joseph Jurgens, Junedh Amrute, +13 more
1citations -
AAV-Delivered Anti-PC-OxPL Antibody Fragments: A Novel Therapeutic Approach to Target ALS2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Amyotrophic Lateral Sclerosis Research
Andreia Gomes‐Duarte, Jamie K. Wong, Svetlana Pasteuning-Vuhman, Wouter Pos, Rob Haselberg, Marina Sogorb-González, +6 more
1citations -
SwarmMAP: Swarm Learning for Decentralized Cell Type Annotation in Single Cell Sequencing Data2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Ping Zhu, Rafael Kramann, Sikander Hayat, +1 more
1citations -
The landscape of tertiary lymphoid structures in endometrial cancer revealed through harmonized multi-level transcriptomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Marta Requesens, Koen Brummel, Arkajyoti Bhattacharya, Feija Somefun, Nienke van Rooij, Annechien Plat, +10 more
0citations -
Long Non-Coding RNAs in Response to Ebola Virus Vaccine-Induced Immunity2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Izabela Mamede, Thomaz Lüscher Dias, Isabelle Franco Moscardini, Barbara Marinho, Fernando Marcon, Thiago Dominguez Crespo Hirata, +11 more
0citations -
Totum-448, a polyphenol-rich plant extract, decreases hepatic steatosis and inflammation in diet-induced MASLD mice2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Liver Disease Diagnosis and Treatment Open access
Joost M. Lambooij, Vivien Chavanelle, Marie Vallier, Hendrik J.P. van der Zande, Yolanda F. Otero, Frank Otto, +7 more
0citations -
In vitro programming and pseudounipolarization of human iPSC-derived sensory neurons2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access
Pascal Röderer, Ana Catarina Costa, Martha Lürkens, Fiona Roll, Franziska Buck, Luzia Heidrich, +19 more
0citations -
Cell Type-Specific and Diabetic Kidney Disease-Associated Expression of Long Non-Coding RNAs in Human Kidneys2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research
Juliette A. de Klerk, Roderick C. Slieker, Hao Wu, Yoshiharu Muto, Rudmer J. Postma, Leen M. ‘t Hart, +14 more
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End of preservation normothermic machine perfusion of porcine kidneys after ischaemic injury reprograms metabolism and induces fibrosis after transplant despite unchanged function: insights from the renal proteome2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Organ Transplantation Techniques and Outcomes Open access
John F. Mulvey, Corinna Snashall, Kaithlyn M. Rozenberg, Maria Letizia Lo Faro, Marco Eijken, Stine Lohmann, +10 more
0citations -
Functional characterisation of rare variants in genes encoding the MAPK/ERK signalling pathway identified in long-lived Leiden Longevity Study participants2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetics, Aging, and Longevity in Model Organisms Open access
Helena M. Hinterding, Maarouf Baghdadi, Thies Gehrmann, Pasquale C. Putter, Mara Neuerburg, Nico Lakenberg, +4 more
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Systems-wide analysis of the GATC-binding nucleoid-associated protein Gbn and its impact on Streptomyces development2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Chao Du, Joost J. Willemse, Amanda M. Erkelens, Víctor J. Carrión, Remus Thei Dame, Gilles P. van Wezel
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Bridging the Gap: biofilm-mediated establishment of Bacillus velezensis on Trichoderma guizhouense mycelia2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Jiyu Xie, Xinli Sun, Yanwei Xia, Lili Tao, Taimeng Tan, Nan Zhang, +5 more
0citations -
Colon cancer and cell transformation by clinical Salmonella strains are associated with bacterial virulence and intracellular fitness2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Salmonella and Campylobacter epidemiology Open access
Virginie Stévenin, Claudia E. Coipan, Janneke W. Duijster, Daphne M. van Elsland, Linda Voogd, Angela H. A. M. van Hoek, +7 more
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Systematic comparison of temporal transcriptional responses to hepatotoxicants in primary human hepatocytes and HepaRG cells using concentration-response modelling of gene co-expression networks2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Steven J. Kunnen, Emma Arnesdotter, Christian Tobias Willenbockel, Mathieu Vinken, Bob van de Water
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A clusterability measure for single-cell transcriptomics reveals phenotypic subpopulations2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Maria Mircea, Mazène Hochane, Xueying Fan, Susana M. Chuva de Sousa Lopes, Diego Garlaschelli, Stefan Semrau
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Methylation-Guided Stratification of Colorectal Cancer Reveals Immune Subtypes with Distinct Clinical Outcomes2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation
Eiman I. Ahmed, Raghvendra Mall, Christophe Michel Raynaud, Heba Saadeh, Shimaa Sherif, Rania Alanany, +4 more
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O-GlcNAcylation and low glycolysis underpin Th2 polarization by dendritic cells2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Leonard R. Pelgrom, Marjolein Quik, Thiago A. Patente, Graham A. Heieis, Alexey Sergushichev, Jie Kang, +18 more
0citations