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Gut colonisation by extended-spectrum β-lactamase-producing Escherichia coli and its association with the gut microbiome and metabolome in Dutch adults: a matched case-control study2022 The Lancet Microbe article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Quinten R. Ducarmon, Romy Daniëlle Zwittink, Roel P J Willems, Aswin Verhoeven, Sam Nooij, Fiona R.M. van der Klis, +6 more
40citations -
Towards complete and error-free genome assemblies of all vertebrate species2021 Nature article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access cited by 1 patent
Arang Rhie, Shane McCarthy, Olivier D. Fedrigo, Joana Damas, Giulio Formenti, Sergey Koren, +93 more
3,333citations -
An educational guide for nanopore sequencing in the classroom2020 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Genetics, Bioinformatics, and Biomedical Research Open access
Alex Salazar, Franklin L. Nóbrega, Christine Anyansi, Cristian Aparicio-Maldonado, Ana Rita Costa, Anna C. Haagsma, +6 more
32citations -
Recurrent and convolutional neural networks in structural dynamics: a modified attention steered encoder–decoder architecture versus LSTM versus GRU versus TCN topologies to predict the response of shock wave-loaded plates31citations
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Multi-omics approach identifies PI3 as a biomarker for disease severity and hyper-keratinization in psoriasis2023 Journal of Dermatological Science article Immunology and Microbiology Psoriasis: Treatment and Pathogenesis Open access
Jingwen Deng, Emmerik F A Leijten, Yongzhan Zhu, Michel Olde Nordkamp, Shuyan Ye, Juliëtte N. Pouw, +8 more
29citations -
Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study2020 PLoS ONE article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Borut Peterlin, Francesca Gualandi, Aleš Maver, Serenella Servidei, Silvère M. van der Maarel, Alexandre Méjat, +2 more
11citations -
Assessing the complementary information from an increased number of biologically relevant features in liquid biopsy-derived RNA-Seq data2024 Heliyon article Biochemistry, Genetics and Molecular Biology Gene expression and cancer classification Open access
Stavros Giannoukakos, Silvia D’Ambrosi, Danijela Koppers‐Lalic, Cristina Gómez‐Martín, Alberto Fernández, Michael Hackenberg
3citations -
Variant Calling in the Dark Genome: Benchmarking SNV Calls in the Flanks of Structural Variants2026 Genomics Proteomics & Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ningxin Dang, Peng Jia, Jiadong Lin, Yongyong Kang, Z K Li, Kai Ye, +1 more
0citations -
Urinary peptides in heart failure: a link to molecular pathophysiology2021 European Journal of Heart Failure article Medicine Heart Failure Treatment and Management Open access cited by 1 patent
Tianlin He, Michaela Mischak, Andrew L. Clark, Ross T. Campbell, Christian Delles, Javier Dı́ez, +25 more
65citations -
The Rauvolfia tetraphylla genome suggests multiple distinct biosynthetic routes for yohimbane monoterpene indole alkaloids2023 Communications Biology article Biochemistry, Genetics and Molecular Biology Plant biochemistry and biosynthesis Open access
Emily Amor Stander, Beata Joanna Lehka, Inês Carqueijeiro, Clément Cuello, Frederik G. Hansson, Hans J. Jansen, +17 more
45citations -
A comprehensive mouse kidney atlas enables rare cell population characterization and robust marker discovery2023 iScience article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Claudio Novella-Rausell, Magda Grudniewska, Dorien J.M. Peters, Ahmed Essam Mahfouz
38citations