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Near telomere-to-telomere genome assemblies of two Chlorella species unveil the composition and evolution of centromeres in green algae2024 BMC Genomics article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Bo Wang, Yanyan Jia, Ningxin Dang, Jie Yu, Stephen J. Bush, Shenghan Gao, +6 more
10citations -
Accurate characterization of CRISPR-Cas9 genome editing outcomes and mosaicism with near-perfect long reads2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Ida Höijer, Robin van Schendel, Anastasia Emmanouilidou, Rebecka Östlund, Ignas Bunikis, Marcel Tijsterman, +2 more
1citations -
Near telomere-to-telomere genome assemblies of two Chlorella species unveil the composition and evolution of centromeres in green algae2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Bo Wang, Yanyan Jia, Ningxin Dang, Stephen J. Bush, Shenghan Gao, Wenxi He, +5 more
0citations -
A Telomere-to-telomere Diploid Reference Genome and Centromere Structure of the Chinese Quartet2025 Genomics Proteomics & Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Bo Wang, Peng Jia, Stephen J. Bush, Shijie Wan, Xiaofei Yang, Pengyu Zhang, +4 more
4citations -
Meta-analysis reveals microbiome signatures for colorectal cancer that are universal across age groups and sequencing methods2026 Cell Host & Microbe review Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Selin Pekel, Nicolai Karcher, Morgan Essex, Fabian Springer, Stefano Romano, Quinten R. Ducarmon, +6 more
7citations -
Performance of Core Genome Multilocus Sequence Typing Compared to Capillary-Electrophoresis PCR Ribotyping and SNP Analysis of Clostridioides difficile2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Clostridium difficile and Clostridium perfringens research Open access
Amoe Baktash, Jeroen Corver, Céline Harmanus, Wiep Klaas Smits, Warren N. Fawley, MH Wilcox, +5 more
1citations -
The genome sequence of Saccopteryx leptura, Schreber, 1774 (Chiroptera, Emballonuridae, Saccopteryx)2026 Wellcome Open Research article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ine Alvarez van Tussenbroek, Mirjam Knörnschild, Martina Nagy, Martin Pippel, Thomas F. Brown, Sylke Winkler, +5 more
0citations -
Genome sequences of 24 Aspergillus niger sensu stricto strains to study strain diversity, heterokaryon compatibility, and sexual reproduction2022 G3 Genes Genomes Genetics article Biochemistry, Genetics and Molecular Biology Fungal and yeast genetics research Open access
Sjoerd J. Seekles, Maarten Punt, Niki Savelkoel, Jos A. M. P. Houbraken, Han A. B. Wösten, Robin A. Ohm, +1 more
20citations -
Optical Genome and Epigenome Mapping of Clear Cell Renal Cell Carcinoma2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Sapir Margalit, Zuzana Tulpová, Yael Michaeli, Tahir Detinis Zur, Jasline Deek, Sivan Louzoun‐Zada, +10 more
6citations -
Genome Analyses of Ten New Ape Adenoviruses with Similarity to Human Mastadenovirus C2022 International Journal of Molecular Sciences article Agricultural and Biological Sciences Animal Virus Infections Studies Open access
Selas T. F. Bots, Vera Kemp, Iris J. C. Dautzenberg, Rob C. Hoeben
5citations -
Optical genome and epigenome mapping of clear cell renal cell carcinoma2025 NAR Cancer article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Sapir Margalit, Zuzana Tulpová, Yael Michaeli, Tahir Detinis Zur, Jasline Deek, Sivan Louzoun Zada, +10 more
4citations -
The complete chloroplast genome and phylogenetic position of Cymbidium hartinahianum, an endemic and endangered orchid of Sumatra, Indonesia2024 Journal of Asia-Pacific Biodiversity article Agricultural and Biological Sciences Plant Diversity and Evolution Open access
Aninda Retno Utami Wibowo, Lina Susanti Juswara, Destri Destri, Diego Bogarín, Imam Bagus Nugroho, Izu Andry Fijridiyanto, +1 more
0citations -
Human intestinal Bacterial Collection (HiBC): Genome sequences2023 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Thomas C. A. Hitch, Johannes M. Masson, Charlie Pauvert, Afrizal Afrizal, Nicole Simone Treichel, Lukas C. Bossert, +1 more
0citations -
Resolution of the D4Z4 repeat responsible for facioscapulohumeral muscular dystrophy with HiFi sequencing2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Xiao Chen, Richard J.L.F. Lemmers, Zev N. Kronenberg, Joseph M. Devaney, Jessica Noya, April S. Berlyoung, +7 more
0citations -
Genome sequence and characterization of Streptomyces phages Vanseggelen and Verabelle, representing two new species within the genus Camvirus2023 Scientific Reports article Environmental Science Bacteriophages and microbial interactions Open access
Véronique Ongenae, Annabel Kempff, Vera van Neer, Helena Shomar, Florian Tesson, Daniel E. Rozen, +2 more
8citations -
Genome-guided isolation and characterization of a novel bacteriophage infecting Escherichia coli reveal a putative new genus2026 Frontiers in Microbiology article Environmental Science Bacteriophages and microbial interactions Open access
Julia Oberdorfer, Jasmin Tesani, Thaysa Leite Tagliaferri, Simon Maurice Schmitz, Eva Miriam Buhl, Florian Kraft, +2 more
0citations -
Genome sequence and characterization of Streptomyces phages Vanseggelen and Verabelle, representing two new species within the genus Camvirus2023 Research Square preprint Environmental Science Bacteriophages and microbial interactions Open access
Véronique Ongenae, Annabel Kempff, Vera van Neer, Helena Shomar, Florian Tesson, Daniel E. Rozen, +2 more
0citations -
Genome-enabled insights into the biology of thrips as crop pests2020 BMC Biology article Biochemistry, Genetics and Molecular Biology Insect Resistance and Genetics Open access
Dorith Rotenberg, Aaron A. Baumann, Sulley K. Ben-Mahmoud, Olivier Christiaens, Wannes Dermauw, Panagiotis Ioannidis, +51 more
106citations -
RNA genome expansion up to 64 kb in nidoviruses is host constrained and associated with new modes of replicase expression2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Animal Virus Infections Studies Open access
Benjamin W. Neuman, Alexandria Smart, Josef Vaas, Ralf F. W. Bartenschlager, Stefan Seitz, Alexander E. Gorbalenya, +2 more
4citations -
Molecular Diagnosis of Facioscapulohumeral Muscular Dystrophy in Patients Clinically Suspected of FSHD Using Optical Genome Mapping2023 Neurology Genetics article Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Naga Guruju, Vanessa Jump, Richard J.L.F. Lemmers, Silvère M. van der Maarel, Ruby Liu, Babi Ramesh Reddy Nallamilli, +6 more
23citations -
The published complete mitochondrial genome of Spotted Greenshank ( Tringa guttifer ) is a chimera with DNA from Red-necked Stint ( Calidris ruficollis ) (Aves: Charadriiformes)4citations
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Mycoheterotrophy and plastid genome evolution in the early-diverging epidendroid orchid tribe Nervilieae: independent transitions in Epipogium and Stereosandra2026 AoB Plants article Agricultural and Biological Sciences Plant Diversity and Evolution Open access
Craig F. Barrett, Cameron W. Corbett, Samuel V. Skibicki, Vincent S. F. T. Merckx, Matthew C. Pace, Paul M. Peterson
0citations