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Hackathons as essential tools in an interdisciplinary biological training - report from trainings for Sub-saharan students2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Engineering Biomedical and Engineering Education Open access
Marvin van Aalst, Tobias Pfennig, Faraimunashe Chirove, Marilyn Ronoh, Anna Matuszyńska
1citations -
A multi-field decomposed model order reduction approach for thermo-mechanically coupled gradient-extended damage simulations2024 arXiv (Cornell University) preprint Physics and Astronomy Model Reduction and Neural Networks Open access
Qinghua Zhang, Stephan Ritzert, Jian Zhang, Jannick Kehls, Stefanie Reese, Tim Brepols
0citations -
Identifying commonalities between cell lines and tumors at the single cell level using Sobolev Alignment of deep generative models2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Soufiane M. C. Mourragui, Joseph C. Siefert, Marcel J. T. Reinders, Marco Loog, Lodewyk F.A. Wessels
2citations -
MULTIMAP TARGETED FREE ENERGY ESTIMATION: A MECHANICAL EMBEDDING QM/MM SCHEME FOR PROTEIN-LIGAND AFFINITIES2026 ChemRxiv preprint Pharmacology, Toxicology and Pharmaceutics Computational Drug Discovery Methods Open access
Jacques Gay, Andrea Rizzi, Shina Caroline Lynn Kamerlin, Davide Mandelli, Paolo Carloni
0citations -
HiFormer: Hierarchical Multi-scale Representations Using Transformers for Medical Image Segmentation2022 arXiv (Cornell University) preprint Computer Science Medical Image Segmentation Techniques Open access
Moein Heidari, Amirhossein Kazerouni, Milad Soltany, Reza Azad, Ehsan Khodapanah Aghdam, Julien Cohen‐Adad, +1 more
3citations -
gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Daniel C. Morgan, Kimberly Glass, Marieke L. Kuijjer, Dawn Lisa DeMeo, John Quackenbush
2citations