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SwarmMAP: Swarm Learning for Decentralized Cell Type Annotation in Single Cell Sequencing Data2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Ping Zhu, Rafael Kramann, Sikander Hayat, +1 more
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Host-microbial interactions at the nasal mucosa in young children and adults: A retrospective, cross-sectional study2026 Cell Reports article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Jesús Reiné, Lisa A. King, Youvika Singh, Wouter A. A. de Steenhuijsen Piters, Beatriz F. Carniel, Carla Solórzano, +27 more
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AAV-Delivered Anti-PC-OxPL Antibody Fragments: A Novel Therapeutic Approach to Target ALS2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Amyotrophic Lateral Sclerosis Research
Andreia Gomes‐Duarte, Jamie K. Wong, Svetlana Pasteuning-Vuhman, Wouter Pos, Rob Haselberg, Marina Sogorb-González, +6 more
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PCSK9 affects expression of key surface proteins in human pancreatic beta cells through intra- and extracellular regulatory circuits2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic function and diabetes Open access
Kevin Saitoski, Maria Ryaboshapkina, Ghaith M. Hamza, Andrew F. Jarnuczak, Claire Berthault, Françoise Carlotti, +7 more
1citations -
Determining off-target effects of splice-switching antisense oligonucleotides using short read RNAseq in neuronally differentiated human induced pluripotent stem cells2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Elsa C. Kuijper, Linda M. van der Graaf, Barry A. Pepers, Mariana Guimarães Ramos, Sylvia Korhorn, Davy Cats, +4 more
1citations -
Microbial and molecular signatures for enhanced gut health in pigs fed a diet with spray-dried plasma as functional protein source2025 Frontiers in Animal Science article Agricultural and Biological Sciences Animal Nutrition and Physiology Open access
Soumya Kanti Kar, Dirkjan Schokker, Carine van Vuure, Herman van Iersel, Amy C. Harms, L. Kruijt, +2 more
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Human Scattered Tubular Cells Represent a Heterogeneous Population of Glycolytic Dedifferentiated Proximal Tubule Cells2022 Journal of the American Society of Nephrology conference-abstract Medicine Acute Kidney Injury Research
Martijn van den Broek, Jennifer Eymael, Laura Miesen, Valerie Villacorta Monge, Bartholomeus T. van den Berge, Fieke Mooren, +9 more
1citations -
The Human Pancreas Cell Atlas defines a healthy reference framework for disease contextualization and translational benchmarking2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Shrey Parikh, Daniel C. Strobl, Sara Jiménez, Julia Beckmann, Lucas Arnoldt, Eljas Roellin, +19 more
1citations -
Zebrafish eye development and function is affected by crude oil exposure – line of evidence from underlying molecular effects to behavioral consequences2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Environmental Toxicology and Ecotoxicology Open access
Leonie K. Mueller, Sarah Johann, Bernd Denecke, Ali Taleb Abdallah, Markus Hecker, Henner Hollert, +1 more
1citations -
T cell correction pipeline for Inborn Errors of Immunity2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Katariina Mamia, Solrun Kolbeinsdottir, Zhuokun Li, Kornel Labun, Anna Zofia Komisarczuk, Salla Keskitalo, +22 more
1citations -
Neonatal Peyer’s patch cDC activation as a pacemaker of postnatal immune maturation2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Immunotherapy and Immune Responses Open access
Natalia Torow, R. Li, Thomas C. A. Hitch, Clemens Mingels, Shahed Al Bounny, Niels van Best, +16 more
1citations -
A comprehensive and centralized database for exploring omics data in Autoimmune Diseases2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Jordi Martorell‐Marugán, Raúl López-Domínguez, Adrián García-Moreno, Daniel Toro Dominguez, Juan Antonio Villatoro-García, Guillermo Barturen, +10 more
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Abstract PD5-08: Tumor immune-cell activity assessed by RNAseq is an independent predictor of therapy response and prognosis after neoadjuvant chemotherapy in HER2 negative breast cancer patients - An analysis of the GeparSepto trial2020 Cancer Research conference-abstract Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies cited by 1 patent
Peter Andreas Fasching, Carsten Denkert, Stephen Charles Benz, Karsten Ernst Weber, Christopher W. Szeto, Jan Budczies, +17 more
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ABCB1 overexpression through locus amplification represents an actionable target to combat paclitaxel resistance in pancreatic cancer cells2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Drug Transport and Resistance Mechanisms Open access
Cecilia Bergonzini, Alessandro Gregori, Tessa M. S. Hagens, Vera E. van der Noord, Bob van de Water, Annelien J.M. Zweemer, +9 more
1citations -
Androgen production in adrenocortical H295R cells is regulated by thyroid hormone T3 without reciprocal thyroid axis modulation in pediatric CAH2026 The Journal of Steroid Biochemistry and Molecular Biology article Medicine Sexual Differentiation and Disorders Open access
Philipp Augsburger, Therina du Toit, Emre Murat Altınkılıç, Sabine Elisabeth Hannema, Christiaan de Bruin, Evangelia Charmandari, +2 more
1citations