Papers matching “transcriptome annotation” 90
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An examination of the quinic acid utilization genes in Aspergillus niger reveals the involvement of 2 pH-dependent permeases2025 G3 Genes Genomes Genetics article Biochemistry, Genetics and Molecular Biology Fungal and yeast genetics research Open access
Ian D. Reid, Mark Arentshorst, Arthur F. J. Ram, Adrian Tsang
2citations -
A collaborative network analysis for the interpretation of transcriptomics data in Huntington’s disease2025 Scientific Reports article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Ozan Özışık, Nazli Sila Kara, Tooba Abbassi‐Daloii, Morgane Térézol, Elsa C. Kuijper, Núria Queralt-Rosiñach, +7 more
1citations -
1053 Identification of distinct immune landscapes of infiltrating T cells in colon cancer using multiplex immunofluorescence staining2022 Regular and Young Investigator Award Abstracts conference-abstract Medicine Cancer Immunotherapy and Biomarkers Open access
Hehuan Zhu, Jessica P Roelands, Imke Stouten, Rachel Hoorntje, Ronald L. P. van Vlierberghe, Marieke E. Ijsselsteijn, +5 more
1citations -
Collaborative network analysis for the interpretation of transcriptomics data in rare diseases, an application to Huntington’s disease2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Ozan Özışık, Tooba Abbassi‐Daloii, Morgane Térézol, Núria Queralt-Rosiñach, Annika Jacobsen, Osman Uğur Sezerman, +5 more
0citations -
A patient-centric knowledge graph approach to prioritize mutants for selective anti-cancer targeting2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Marina Gorostiola González, Adriaan P. IJzerman, Gerard J. P. van Westen
0citations -
Spatial profiling of gastric cancer patient-matched primary and locoregional metastases reveals principles of tumour dissemination2020 White Rose Research Online (University of Leeds, The University of Sheffield, University of York) article Medicine Gastric Cancer Management and Outcomes Open access
Raghav Sundar, Drolaiz Hw Liu, Gordon G. A. Hutchins, Hayley Slaney, Arnaldo N. S. Silva, Jan Oosting, +8 more
0citations -
OP0018 Characterizing ANCA-specific B cells in ANCA-associated Vasculitis Patients2025 Annals of the Rheumatic Diseases conference-abstract Medicine Vasculitis and related conditions Open access
Laura S. van Dam, Mengrui Zhang, Shima Parsafar, Audra L. Horomanski, Sajede Rasouli, Orr Sharpe, +5 more
0citations -
Abstract 5731: ID4 maintains undifferentiated and immune-evasive states in aggressive triple-negative breast cancer and represents a novel druggable vulnerability2026 Cancer Research conference-abstract Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies
Lautaro Rivera, Carla Toro, Juan Manuel Fernández, Jochen Maurer, Marı́a Teresita Branham
0citations -
Donor-specific, but not sex-specific, signatures dominate cell-type classification in lung scRNA-seq data2026 Biochemistry and Biophysics Reports article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nora Ghenciulescu, Marcel J. T. Reinders, Ahmed Essam Mahfouz
0citations -
P020 Mapping the changing intercellular communication and its downstream effect in Ulcerative Colitis2021 Journal of Crohn s and Colitis conference-abstract Biochemistry, Genetics and Molecular Biology Inflammatory Bowel Disease Open access
Lejla Potari-Gul, Dezső Módos, Dénes Türei, Alberto Valdeolivas, Matthew Madgwick, Julio Sáez-Rodríguez, +1 more
0citations -
obophenotype/cell-ontology: 2026-03-17 Release2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Shawn Tan, Chris J Mungall, Aleix Puig, Nicole Vasilevsky, David Osumi-Sutherland, Nicolas Matentzoglu, +22 more
0citations