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Transcriptomic signatures associated with regional cortical thickness changes in Parkinson’s disease2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Parkinson's Disease Mechanisms and Treatments Open access
Arlin Keo, Oleh Dzyubachyk, Jeroen van der Grond, Jacobus Johannes van Hilten, Marcel J. T. Reinders, Ahmed Essam Mahfouz
0citations -
Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering2026 Nature Methods article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jieran Sun, Kirti Biharie, Peiying Cai, Niklas Müller‐Bötticher, Paul Kießling, Meghan A. Turner, +47 more
5citations -
Neuronal extracellular vesicles and associated microRNAs induce circuit connectivity downstream BDNF2023 Cell Reports article Biochemistry, Genetics and Molecular Biology Extracellular vesicles in disease Open access
Anna Antoniou, Loic Auderset, Lalit Kaurani, Eva Sebastian, Maria Allahham, Silvia Cases‐Cunillera, +4 more
104citations -
Epigenetic neural glioblastoma enhances synaptic integration and predicts therapeutic vulnerability2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Glioma Diagnosis and Treatment Open access
Richard Drexler, Robin Khatri, Thomas Sauvigny, Malte Mohme, Cécile L. Maire, Alice Senta Ryba, +36 more
10citations -
Mapping naturally presented T cell antigens in medulloblastoma based on integrative multi-omics2025 Nature Communications article Immunology and Microbiology Immunotherapy and Immune Responses Open access
Julia Velz, Lena Katharina Freudenmann, Gioele Medici, Marissa Lisa Dubbelaar, Malte Mohme, David R. Ghasemi, +31 more
9citations -
Immediate reuse of patch-clamp pipettes after ultrasonic cleaning2024 Scientific Reports article Neuroscience Neuroscience and Neuropharmacology Research Open access
Kévin Jehasse, Jean-Sébastien Jouhanneau, Sophie Wetz, Alexander Schwedt, James F.A. Poulet, Peter Neumann-Raizel, +1 more
1citations -
Comparative transcriptomics reveals human-specific cortical features2023 Science article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nikolas L. Jorstad, Janet H. T. Song, David Exposito-Alonso, Hamsini Suresh, Nathan Castro-Pacheco, Fenna M. Krienen, +37 more
209citations -
Hao-Fountain syndrome protein USP7 controls neuronal differentiation via BCOR–ncPRC1.12025 Genes & Development preprint Biochemistry, Genetics and Molecular Biology Ubiquitin and proteasome pathways Open access
Joyce Wolf van der Meer, Axelle Larue, Jan A. VAN DER KNAAP, Gillian E. Chalkley, Ayestha Sijm, Leila Beikmohammadi, +14 more
6citations -
Particle Type- and Morphology-Associated Neurotoxicity of Microplastics and Nanoplastics via Divergent PPARγ Modulation in Zebrafish2026 Journal of Hazardous Materials article Environmental Science Microplastics and Plastic Pollution Open access
Chenchen Han, Lixia Peng, Xinlei Guo, Yaqi Yu, Mingming Niu, Willie J.G.M. Peijnenburg, +4 more
0citations -
An integrated single‐cell RNA ‐seq atlas of the mouse hypothalamic paraventricular nucleus links transcriptomic and functional types2024 Journal of Neuroendocrinology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jari B. Berkhout, Delaram Poormoghadam, Chun‐Xia Yi, Andries Kalsbeek, Onno Cornelis Meijer, Ahmed Essam Mahfouz
38citations -
Evaluating exon-skipping therapies targeting the central nervous system in Duchenne muscular dystrophy using high-resolution spatial transcriptomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Sharon I. de Vries, L. Heezen, Ophélie Vacca, Mathilde Doisy, Annemieke M Aartsma-Rus, Maaike van Putten, +3 more
1citations -
Proteomic, metabolomic, and transcriptomic examination of APOE transgenic mice2020 Alzheimer s & Dementia article Medicine Alzheimer's disease research and treatments Open access
Eric G. Mohler, Janina S. Ried, Lamiaa Bahnassawy, Peter Reinhardt, Marco Rocha Curado, Margot H.M. Bakker, +6 more
1citations -
Human Neocortical Glutamatergic Neurons Revealed Through Multimodal Profiling2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Rachel A. Dalley, Sarah Walling-Bell, Jeremy A. Miller, Femke Waleboer, Julian Thijssen, Audrey McCutcheon, +92 more
3citations -
Cytotoxic T cell recognition of α-synuclein drives pathogenic immune responses in multiple system atrophy2026 Proceedings of the National Academy of Sciences article Medicine Parkinson's Disease Mechanisms and Treatments Open access
Jae‐Seung Moon, Salvinaz Islam Moutusy, Mengrui Zhang, Alain Ndayisaba, Diego Rodriguez, Daniel N. El Kodsi, +12 more
2citations -
Abstract P5-14-01: Transcriptomic insights into lobular breast cancer biology: a retrospective analysis of the MINDACT clinical trial2023 Cancer Research conference-abstract Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies
Christine Desmedt, Ha-Linh Nguyen, Sabine C. Linn, Otto Metzger, Coralie Poncet, Jelle Wesseling, +15 more
0citations -
Reference-based cell type matching of spatial transcriptomics data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yun Zhang, Jeremy A. Miller, Jeongbin Park, Boudewijn P. F. Lelieveldt, Brian Long, Tamim Abdelaal, +12 more
5citations