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P20-07 Transcriptome data to substantiate the assessment of similar mechanism of actions in a context of compound induced pulmonary fibrosis2022 Toxicology Letters article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
W. Zobl, M. Wehr, J. Koschmann, D. De Luca, B.A. Kühne, H Vrieling, +3 more
0citations -
Mining a human transcriptome database for chemical modulators of NRF22020 PLoS ONE article Biochemistry, Genetics and Molecular Biology Genomics, phytochemicals, and oxidative stress Open access
John P. Rooney, Brian N. Chorley, Steven W. Hiemstra, Steven Wink, Xuting Wang, Douglas A. Bell, +2 more
54citations -
Transcriptome signature of miRNA-26b KO mouse model suggests novel targets2021 BMC Genomic Data article Biochemistry, Genetics and Molecular Biology MicroRNA in disease regulation Open access
Emiel P. C. van der Vorst, Mario A. A. Pepe, Linsey J. F. Peters, Markus Haberbosch, Yvonne J. F. M. Jansen, Ronald Naumann, +3 more
14citations -
Mapping the glial transcriptome in Huntington’s disease using snRNAseq: selective disruption of glial signatures across brain regions2024 Acta Neuropathologica Communications article Neuroscience Genetic Neurodegenerative Diseases Open access
Sunniva M. K. Bøstrand, Luise A. Seeker, Nadine Bestard-Cuche, Nina-Lydia Kazakou, Sarah Jäkel, Boyd Kenkhuis, +5 more
11citations -
Reliable Genomic Integration Sites in Pseudomonas putida Identified by Two-Dimensional Transcriptome Analysis2024 ACS Synthetic Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 1 patent
Sebastian Köbbing, Thorsten Lechtenberg, Benedikt Wynands, Lars M. Blank, Nick J. P. Wierckx
11citations -
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells2021 Genome Medicine article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Shadi Darvish Shafighi, Szymon M. Kiełbasa, Julieta Sepúlveda-Yáñez, Ramin Monajemi, Davy Cats, Hailiang Mei, +5 more
10citations -
Global Transcriptome Analysis Reveals Distinct Phases of the Endothelial Response to TNF2023 The Journal of Immunology article Immunology and Microbiology interferon and immune responses Open access
Eike C. Struck, Tatiana Belova, Ping‐Han Hsieh, Jacob Odeberg, Marieke L. Kuijjer, Philip Dusart, +1 more
5citations -
Comprehensive lincRNA Transcriptome in Acute Myeloid Leukemia: Integrating Known and Newly Identified lincRNAs Across Pediatric and Adult Cohorts2026 Non-Coding RNA article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Saioa Arza-Apalategi, Daan Gilissen, Anne van der Grinten, Seline N. van den Oever, Erik B. van den Akker, Marieke Griffioen, +4 more
0citations -
Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information2020 Nature Communications article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Sebastian Guelfi, Karishma D’Sa, Juan Antonio Botía, Jana Vandrovcová, Regina Hertfelder Reynolds, David Zhang, +94 more
39citations -
The Hippocampal Response to Acute Corticosterone Elevation Is Altered in a Mouse Model for Angelman Syndrome2022 International Journal of Molecular Sciences article Neuroscience Stress Responses and Cortisol Open access
Eva M. G. Viho, A. Mattijs Punt, Ben Distel, René Houtman, Jan Kroon, Ype Elgersma, +1 more
8citations -
Identification of molecular toxicity pathways across early life-stages of zebrafish exposed to PCB126 using a whole transcriptomics approach2020 Ecotoxicology and Environmental Safety article Environmental Science Toxic Organic Pollutants Impact Open access
Henriette Meyer-Alert, Steve B. Wiseman, Song Tang, Markus Hecker, Henner Hollert
4citations -
Lipid-induced transcriptomic changes in blood link to lipid metabolism and allergic response2023 Nature Communications article Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Koen F. Dekkers, Roderick C. Slieker, Andreea Ioan‐Facsinay, Maarten van Iterson, M. Arfan Ikram, Marleen M. J. van Greevenbroek, +6 more
19citations -
A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied2021 PLoS ONE article Biochemistry, Genetics and Molecular Biology Venomous Animal Envenomation and Studies Open access
Freek J. Vonk, Mátyás A. Bittenbinder, Harald M. I. Kerkkamp, Dwin G.B. Grashof, John Patrick Archer, Sandra Afonso, +3 more
8citations -
A Combined Lifestyle Intervention Induces a Sensitization of the Blood Transcriptomic Response to a Nutrient Challenge2024 article Biochemistry, Genetics and Molecular Biology Nutrition, Genetics, and Disease Open access
Thies Gehrmann, P. Eline Slagboom, Marian Beekman, Joris Deelen, Linda Partridge, Ondine van de Rest, +6 more
1citations -
Impaired resolution of blood transcriptomes through tuberculosis treatment with diabetes comorbidity2023 Clinical and Translational Medicine article Medicine Tuberculosis Research and Epidemiology Open access
Clare Eckold, Cassandra L. R. van Doorn, Rovina Ruslami, Katharina Ronacher, Anca‐Lelia Riza, Suzanne van Veen, +19 more
8citations -
Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification2022 Frontiers in Marine Science article Earth and Planetary Sciences Ocean Acidification Effects and Responses Open access
Paula Ramos‐Silva, Mari-Lee Odendaal, Deborah Wall-Palmer, Lisette Mekkes, Katja T. C. A. Peijnenburg
6citations -
Triglycerides and T Cells in Cardiovascular Risk2025 JACC Basic to Translational Science article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Nathalie A. Reilly, Janneke W.C.M. Mulder, Koen F. Dekkers, Thomas B. Kuipers, Leonie C. van Vark‐van der Zee, Monique T Mulder, +3 more
4citations -
Differential reprogramming of breast cancer subtypes in 3D cultures and implications for sensitivity to targeted therapy2021 Scientific Reports article Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies Open access
Esmee Koedoot, Liesanne Wolters, Marcel Smid, Peter Stoilov, Gerhard A. Burger, Bram Herpers, +5 more
60citations