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Modeling neuron-astrocyte interactions in neural networks using distributed simulation2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neural dynamics and brain function Open access
Han-Jia Jiang, Jugoslava Aćimović, Tiina Manninen, Iiro Ahokainen, Jonas Stapmanns, Mikko Lehtimäki, +4 more
4citations -
SeroBA(v2.0) and SeroBAnk: a robust genome-based serotyping scheme and comprehensive atlas of capsular diversity in Streptococcus pneumoniae2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pneumonia and Respiratory Infections Open access
Oliver Lorenz, Alannah C. King, Harry C. H. Hung, Feroze Ganaie, Anne L. Wyllie, Sam Manna, +8 more
3citations -
Ancient and recent riverine gene flow contributed to the adaptive radiation of sailfin silversides in Wallace's Dreampond2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetic diversity and population structure Open access
Els L. R. De Keyzer, Fabian Herder, Astrid Böhne, Francisco Campuzano Jiménez, Valentina Burskaia, Sandra Kukowka, +3 more
1citations -
NUMA balancing hampering performance of spiking network simulations2026 arXiv (Cornell University) preprint Computer Science Parallel Computing and Optimization Techniques Open access
Melissa Lober, Alp Inangu, Gorka Peraza Coppola, D. Terhorst, Sebastian Gillessen, Jan Vogelsang, +6 more
0citations -
Empirical Material Sampling and Linearisation -- A Simple and Efficient Strain-Space Model Order Reduction Approach for Computational Homogenisation in Large-Deformation Hyperelasticity0citations
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FROG Analysis Ensures the Reproducibility of Genome Scale Metabolic Models2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Karthik Raman, Miroslav Kratochvíl, Brett G. Olivier, Matthias König, Pratyay Sengupta, Dinesh Kumar Kuppa Baskaran, +85 more
11citations -
PAV-spotter: using signal cross-correlations to identify Presence/Absence Variation in target capture data2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Manon Chantal de Visser, Chris van der Ploeg, Milena Cvijanović, Tijana Z. Vučić, Anagnostis Theodoropoulos, Ben Wielstra
4citations -
Brain signal predictions from multi-scale networks using a linearized framework2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neural dynamics and brain function Open access
Espen Hagen, Steinn Hauser Magnússon, Torbjørn V. Ness, Geir Halnes, Pooja N. Babu, Charl Linssen, +2 more
3citations