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Validity of tissue homogeneity in confocal laser endomicroscopy on the diagnosis of laryngeal and hypopharyngeal squamous cell carcinoma2022 European Archives of Oto-Rhino-Laryngology article Computer Science AI in cancer detection Open access
Matti Sievert, Marc Aubreville, Antoniu‐Oreste Gostian, Konstantinos Mantsopoulos, Michael Koch, Sarina K. Mueller, +7 more
10citations -
Tracking metabolites at single-cell resolution reveals metabolic dynamics during plant mitosis2022 PLANT PHYSIOLOGY article Agricultural and Biological Sciences Plant Molecular Biology Research Open access
Emiko Okubo-Kurihara, Ahmed Ali, Mika Hiramoto, Yukio Kurihara, Yasmine Abouleila, Eman Muhammad Abdelazem, +11 more
9citations -
PHLOWER - Single cell trajectory analysis using Hodge Decomposition2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Mingbo Cheng, Jitske Jansen, Katharina C. Reimer, James Shiniti Nagai, Zhijian Li, Paul Kießling, +5 more
0citations -
SIRV: Spatial inference of RNA velocity at the single-cell resolution2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Laurens M. Grossouw, R. Jeroen Pasterkamp, Boudewijn P. F. Lelieveldt, Marcel J. T. Reinders, Ahmed Essam Mahfouz
12citations -
SIngle cell level Genotyping Using scRna Data (SIGURD)2024 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martin Graßhoff, Milena Kalmer, Nicolas Chatain, Kim Kricheldorf, Angela Maurer, Ralf Weiskirchen, +2 more
2citations -
SIngle cell level Genotyping Using scRna Data (SIGURD)2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martin Graßhoff, Milena Kalmer, Nicolas Chatain, Kim Kricheldorf, Angela Maurer, Ralf Weiskirchen, +2 more
0citations -
Cell Painting PLUS reveals phenotypic signatures for nephrotoxicity profiling in human RPTEC/TERT12026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Marlene Wedler, José M. Muiño, Christopher Wolff, Palle Steen Helmke, Gerhard Franz Ecker, Joshua Harrill, +6 more
0citations -
CAVACHON: a hierarchical variational autoencoder to integrate multi-modal single-cell data2024 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ping‐Han Hsieh, Ru-Xiu Hsiao, Katalin Ferenc, Anthony Mathelier, Rebekka Burkholz, Chien‐Yu Chen, +3 more
0citations -
Interindividual HLA Evolutionary Divergence in Single HLA-Mismatched Unrelated Donor Hematopoietic Cell Transplantation for Malignant Hematological Disorders: A Report on Behalf of the Cellular Therapy and Immunobiology Working Party of the EBMT
Simona Pagliuca, Jarl Mooyaart, Nicolaus Kröger, Jürgen Finke, Victoria T. Potter, Peter Dreger, +22 more
0citations -
Single-Cell Resolution of Cellular Damage Illuminates Disease Progression2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tsimafei Padvitski, Paula Unger Avila, He Chen, Fabian Braun, David Unnersjö‐Jess
1citations -
Automated Sarcomere Structure Analysis for Studying Cardiotoxicity in Human Pluripotent Stem Cell-Derived Cardiomyocytes2022 Microscopy and Microanalysis article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Lu Cao, Linde Schoenmaker, Simone A. ten Den, Robert C. J. J. Passier, Verena Schwach, Fons J. Verbeek
7citations -
Optimized summary-statistic-based single-cell eQTL meta-analysis2025 Scientific Reports article Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Maryna Korshevniuk, Harm-Jan Westra, Roy Oelen, Monique G.P. van der Wijst, Lude Franke, Marc Jan Bonder, +31 more
3citations -
Comparison of the performance of two targeted metagenomic virus capture probe-based methods using reference control materials and clinical samples2024 Journal of Clinical Microbiology article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Kees Mourik, Igor A. Sidorov, Ellen C. Carbo, David van der Meer, Arnoud Boot, Aloys C.M. Kroes, +3 more
29citations -
Proteome-wide quantitative RNA interactome capture (qRIC) identifies phosphorylation sites with regulatory potential in RBM202021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Carlos H. Vieira-Vieira, Vita Dauksaite, Michael Gotthardt, Matthias Selbach
0citations -
Profiling (placental) DNA methylation in cell-free DNA across gestation: the Rotterdam Periconception Cohort2025 Molecular Human Reproduction article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Marjolein M. van Vliet, Ruben Boers, Joachim Boers, Olivier J. M. Schäffers, Lotte E. van der Meeren, Joost H. Gribnau, +2 more
7citations -
Cell type heterogeneity in gene co-expression networks: implications for toxicological research2025 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Imke B. Bruns, Yingxue Li, James L. Stevens, Bob van de Water, Giulia Callegaro
3citations -
Relative tumour budding (TB rel) predicts occult nodal metastasis, aggressiveness and survival in oral squamous cell carcinoma2026 Journal of Cranio-Maxillofacial Surgery article Medicine Head and Neck Cancer Studies Open access
J. Peppler, Claudio Cacchi, Janik Riese, A. Klein, A. Rashad, Kai Wermker, +4 more
1citations