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Investigating Enzyme Function by Geometric Matching of Catalytic Motifs2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
2citations -
Investigating enzyme function by geometric matching of catalytic motifs2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
0citations -
Circuit Topology Approach for the Comparative Analysis of Intrinsically Disordered Proteins2023 Journal of Chemical Information and Modeling article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Barbara Scalvini, Vahid Sheikhhassani, Nadine van de Brug, Laurens W.H.J. Heling, Jeremy D. Schmit, Alireza Mashaghi
10citations -
Genome-wide mapping of therapeutically-relevant SARS-CoV-2 RNA structures2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access cited by 5 patents
Ilaria Manfredonia, Chandran Nithin, Almudena Ponce-Salvatierra, Pritha Ghosh, Tomasz K. Wirecki, Tycho Marinus, +5 more
22citations -
An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community2021 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access
Pallab Bhowmick, Simon Roome, Christoph H. Borchers, David R. Goodlett, Yassene Mohammed
23citations -
Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell2024 Bioinformatics article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Remco L. van den Broek, Xabier Bello, Rebecca V Küpper, Gerard J. P. van Westen, Willem Jespers, Hugo Gutiérrez‐de‐Terán
5citations -
Coupling cryo-electron tomography with mixed-scale dense neural networks reveals re-organization of the invasion machinery of Toxoplasma gondii upon ionophore-stimulation2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Toxoplasma gondii Research Studies Open access
Li-av T. Segev-Zarko, Peter D. Dahlberg, Stella Sun, Daniël M. Pelt, Chi Yong Kim, Elizabeth S. Egan, +3 more
1citations -
Multiphoton Imaging of Maturation in Tissue Engineering2023 Tissue Engineering Part C Methods article Medicine Tissue Engineering and Regenerative Medicine Open access
Maximilian P. Werner, Vytautas Kučikas, Kirsten Voß, Dirk Abel, Stefan Jockenhoevel, Marc A. M. J. van Zandvoort, +1 more
2citations