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DNA polymerase actively and sequentially displaces single-stranded DNA-binding proteins2025 Nature Communications article Physics and Astronomy Force Microscopy Techniques and Applications Open access
Longfu Xu, Shikai Jin, Mia Urem, Seung‐Joo Lee, Meindert Hugo Lamers, Xun Chen, +2 more
3citations -
Nucleic acid-binding bis-acridine orange dyes with improved properties for bioimaging and PCR applications2024 Journal of Materials Chemistry B article Biochemistry, Genetics and Molecular Biology DNA and Nucleic Acid Chemistry Open access
Олеся Г. Кулык, Alexander I. Krivoshey, Olga S. Kolosova, Ivanna Prylutska, Tudor Vasiliu, Răzvan Puf, +7 more
5citations -
Binding pose depth modulates photoswitchable ligands’ efficacy at the 5-HT2A receptor2026 Communications Chemistry article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Verena Weber, Giacomo Salvadori, Federico Natale, Hubert Gerwe, Michael W. Decker, Paolo Carloni, +1 more
0citations -
Binding pose depth modulates photoswitchable ligands’ efficacy at the 5-HT2A receptor2026 Communications Chemistry article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Verena Weber, Giacomo Salvadori, Federico Natale, Hubert Gerwe, Michael W. Decker, Paolo Carloni, +1 more
0citations -
A Complementary Experimental and Theoretical Approach for Probing the Surface Functionalization of ZnO with Molecular Catalyst Linkers2023 Advanced Materials Interfaces article Materials Science Catalytic Processes in Materials Science Open access
Shravan R. Kousik, Helena Solodenko, Azade YazdanYar, Manuel Kirchhof, Peter Schützendübe, Gunther Richter, +4 more
0citations -
Dynamical Signatures of Thermotoga maritima Maltose-Binding Proteins Affected by Ligand Binding2025 ACS Omega article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Shantanu P. Shukla, Laura R. Stingaciu, Christopher B. Stanley, Pratul K. Agarwal, Matthew J. Cuneo, Andreas Maximilian Stadler, +1 more
3citations -
The Thermodynamic Fingerprints of Ultra-Tight Nanobody–Antigen Binding Probed via Two-Color Single-Molecule Coincidence Detection2023 International Journal of Molecular Sciences article Biochemistry, Genetics and Molecular Biology Advanced Fluorescence Microscopy Techniques Open access
Benno Schedler, Olessya Yukhnovets, Lennart Lindner, Alida Meyer, Jörg Fitter
1citations -
The Molecular and Functional Characteristics of HLA-G and the Interaction with Its Receptors: Where to Intervene for Cancer Immunotherapy?2020 International Journal of Molecular Sciences article Immunology and Microbiology Immune Cell Function and Interaction Open access cited by 3 patents
Jiji V. D. Attia, Charlotte E. Dessens, Ricky B. van de Water, Ruben D. Houvast, Peter J.K. Kuppen, Daniëlle Krijgsman
57citations -
An Exploration in the Potential Substance Basis and Mechanism of Chuanxiong Rhizoma and Angelicae Dahuricae Radix on Analgesia Based on Network Pharmacology and Molecular Docking2021 World Journal of Traditional Chinese Medicine article Medicine Traditional Chinese Medicine Analysis Open access
Tingting Zhao, Rui-Rui Lan, Shang-Dong Liang, Günther Schmalzing, Hongwei Gao, Alexei Verkhratsky, +2 more
8citations -
Ligand Pose Predictions for Human G Protein-Coupled Receptors: Insights from the Amber-Based Hybrid Molecular Mechanics/Coarse-Grained Approach2020 Journal of Chemical Information and Modeling article Computer Science Computational Drug Discovery Methods
Ksenia Korshunova, Zeineb Si Chaib, Alejandro Giorgetti, Mercedes Alfonso‐Prieto, Paolo Carloni
16citations -
Time-encoded electrical detection of trace RNA biomarker by integrating programmable molecular amplifier on chip2024 Biosensors and Bioelectronics article Biochemistry, Genetics and Molecular Biology Advanced biosensing and bioanalysis techniques Open access
Marcel Tintelott, Mohit Suranglikar, Antoine Masurier, Xuan Thang Vu, Guillaume Gines, Yannick Rondelez, +4 more
8citations -
Deciphering the allosteric control of androgen receptor DNA binding by its disordered N-terminal domain2025 Molecular and Cellular Endocrinology article Medicine Prostate Cancer Treatment and Research Open access
Laurens W.H.J. Heling, Adam P. Rofe, Andrea Alegre‐Martí, Vahid Sheikhhassani, Thomas Schmidt, Eva Estébanez‐Perpiñá, +2 more
2citations -
Overview on Building Blocks and Applications of Efficient and Robust Extended Tight Binding2025 The Journal of Physical Chemistry A article Physics and Astronomy Advanced Chemical Physics Studies Open access
Abylay Katbashev, Marcel Stahn, Thomas Rose, Vahideh Alizadeh, Marvin Friede, Christoph Plett, +2 more
25citations -
Rational design of an artificial ethylbenzene hydroxylase using a molecular dynamics simulation to enhance enantioselectivity2023 Chemistry Letters article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Koji Oohora, Takako Nishiura, Eiichi Mizohata, Ulrich Schwaneberg, Takashi Hayashi
9citations -
Molecular Basis for Inhibition of Heparanases and β-Glucuronidases by Siastatin B2023 Journal of the American Chemical Society article Chemistry Carbohydrate Chemistry and Synthesis Open access
Yurong Chen, Adrianus M. C. H. van den Nieuwendijk, Liang Wu, E. J. MORAN, Foteini Skoulikopoulou, Vera van Riet, +3 more
7citations -
CMDmpnn: Combining Comparative Molecular Dynamics and ProteinMPNN to Rapidly Expand Enzyme Substrate Spectrum2025 Journal of Chemical Information and Modeling article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics
Chuanqi Sun, Zhimin Li, Ji Yu, Ulrich Schwaneberg, Zonglin Li
4citations -
Ligand Affinities within the Open-Boundary Molecular Mechanics/Coarse-Grained Framework (I): Alchemical Transformations within the Hamiltonian Adaptive Resolution Scheme3citations