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Proficiency testing and cross-laboratory method comparison to support standardisation of diatom DNA metabarcoding for freshwater biomonitoring2025 Metabarcoding and Metagenomics article Environmental Science Environmental DNA in Biodiversity Studies Open access
Valentin Vasselon, Sinziana F. Rivera, Éva Ács, Salomé F.P. Almeida, Karl Blyth Andree, Laure Apothéloz‐Perret‐Gentil, +34 more
18citations -
Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna2024 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Jan‐Niklas Macher, Alejandro Martínez, Sude Çakir, Pierre‐Etienne Cholley, Eleni Christoforou, Marco Curini Galletti, +11 more
22citations -
Best practices in metabarcoding of fungi: From experimental design to results2022 Molecular Ecology article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access
Leho Tedersoo, Mohammad Bahram, Lucie Zinger, R. Henrik Nilsson, Peter Gault Kennedy, Teng Yang, +2 more
345citations -
Metacommunity Theory and Metabarcoding Reveal the Environmental, Spatial and Biotic Drivers of Meiofaunal Communities in Sandy Beaches2025 Molecular Ecology article Earth and Planetary Sciences Marine Biology and Ecology Research Open access
Jan-Niklas Macher, Maximilian Pichler, Simon Creer, Alejandro Martínez, Diego Fontaneto, Willem Renema
14citations -
Environmental DNA metabarcoding reveals comparable responses to agricultural stressors on different trophic levels of a freshwater community2021 Molecular Ecology article Environmental Science Environmental DNA in Biodiversity Studies Open access
Kevin K. Beentjes, S. Henrik Barmentlo, Ellen Cieraad, Menno Schilthuizen, Berry van der Hoorn, Arjen G. C. L. Speksnijder, +1 more
21citations -
Comparing eDNA metabarcoding with morphological analyses: Fungal species richness and community composition of differently managed stages along a forest conversion of Norway spruce towards European beech in Germany2021 Forest Ecology and Management article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions
Peggy Heine, Jonas Hausen, Richard Ottermanns, Martina Roß‐Nickoll
13citations -
Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods2022 GigaScience article Environmental Science Environmental DNA in Biodiversity Studies Open access
Paula Arribas, Carmelo Andújar, Kristine Bohmann, Jeremy R deWaard, Evan P. Economo, Vasco Elbrecht, +13 more
26citations -
Multiple graphical views for automatically generating SQL for the MycoDiversity DB; making fungal biodiversity studies accessible2024 Biodiversity Data Journal article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access
Irene Martorelli, Aram Pooryousefi, Haike van Thiel, Floris Sicking, Guus J. Ramackers, Vincent S. F. T. Merckx, +1 more
0citations -
Multiproxy analysis of permafrost preserved faeces provides an unprecedented insight into the diets and habitats of extinct and extant megafauna2021 Quaternary Science Reviews article Environmental Science Environmental DNA in Biodiversity Studies Open access
Marcel Polling, Anneke T.M. ter Schure, Bas Van Geel, Tom van Bokhoven, Sanne Boessenkool, Glen MacKay, +6 more
18citations -
New insights into biodiversity, biogeography, ecology, and evolution of marine zooplankton based on molecular approaches2021 ICES Journal of Marine Science article Environmental Science Environmental DNA in Biodiversity Studies
Ann Bucklin, Katja T. C. A. Peijnenburg, Ksenia Kosobokova, Ryuji J. Machida
17citations -
Plant diets of land snail community members are similar in composition but differ in richness2021 Journal of Molluscan Studies article Environmental Science Environmental DNA in Biodiversity Studies Open access
Kasper P. Hendriks, Karen Bisschop, Hylke H. Kortenbosch, Anaïs E. A. Larue, Dries Bonte, Elza J. Duijm, +4 more
2citations -
Plant–animal interactions in the era of environmental DNA ( eDNA )—A review2022 Environmental DNA article Environmental Science Environmental DNA in Biodiversity Studies Open access
Pritam Banerjee, Kathryn A. Stewart, Caterina Maria Antognazza, Ingrid Vasconcellos Bunholi, Kristy Deiner, Matthew A. Barnes, +5 more
49citations -
Mitochondrial Cytochrome Oxidase Subunit 1: A Promising Molecular Marker for Species Identification in Foraminifera2022 Frontiers in Marine Science article Biochemistry, Genetics and Molecular Biology Protist diversity and phylogeny Open access
Elsa B. Girard, Anouk Langerak, Jamaluddin Jompa, Owen Simon Wangensteen, Jan‐Niklas Macher, Willem Renema
26citations -
Pan-Arctic plankton community structure and its global connectivity2023 Elementa Science of the Anthropocene article Environmental Science Environmental DNA in Biodiversity Studies Open access
Federico M. Ibarbalz, Nicolas Henry, Frédéric Mahé, Mathieu Ardyna, Adriana Zingone, Eleonora Scalco, +15 more
23citations -
Female pond bats hunt in other areas than males and consume lighter prey when pregnant2023 Journal of Mammalogy article Agricultural and Biological Sciences Bat Biology and Ecology Studies Open access
Anne‐Jifke Haarsma, Eelke Jongejans, Elza J. Duijm, Carolien van der Graaf, Youri Lammers, Milan Sharma, +2 more
15citations -
Coastal eutrophication transforms shallow micro-benthic reef communities2025 The Science of The Total Environment article Environmental Science Coral and Marine Ecosystems Studies Open access
Elsa B. Girard, Andi M. A. Pratama, Laura del Rio-Hortega, Sophie Volkenandt, Jan‐Niklas Macher, Willem Renema
7citations -
Exploring the potential of the COI gene marker for DNA barcoding of planktonic foraminifera2025 Scientific Reports article Environmental Science Environmental DNA in Biodiversity Studies Open access
Elsa B. Girard, Katja T. C. A. Peijnenburg, Jan‐Niklas Macher, Michal Kučera, Raphaël Morard
3citations -
Urban airborne allergenic pollen shows highly local patterns correlated with public green spaces2026 City and Environment Interactions article Medicine Allergic Rhinitis and Sensitization Open access
Nemi Dorst, Maarten Hogeweij, Aukje Clercx, Dominique de Boer, Ilse Thijssen, Leon van Leeuwen, +8 more
1citations -
Environmental DNA sampling protocols for the surveillance of marine non-indigenous species in Irish coastal waters2021 Marine Pollution Bulletin article Environmental Science Environmental DNA in Biodiversity Studies
Sara Fernández, Dulaney L. Miller, Luke E. Holman, Adriaan Gittenberger, Alba Ardura, Marc Rius, +1 more
26citations -
Managing zoosporic infections in microalgae production systems: ecology, detection, risk factors, and biosecurity strategies2026 Aquatic Ecology article Immunology and Microbiology Aquaculture disease management and microbiota
Maja Berden Zrimec, Narcís Ferrer-Ledo, Pietro Marchese, Belén Villarreal-Toribio, Ana Gavrilović, Alena S. Gsell, +23 more
0citations