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Long-read sequencing reveals that the mitochondrial genome of an individual Ixodiphagus hookeri is a mixture of structural variants with an invariable core region and heterogeneous repeat regions2026 Current Research in Parasitology and Vector-Borne Diseases article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ron P. Dirks, Hans J. Jansen, Wouter J. Veneman, Jane Segobola, Valérie O. Baede, Veronika Blažeková, +3 more
0citations -
Benchmarking of shotgun sequencing depth reveals the potential and limitations of shallow metagenomics and strain-level analysis2026 Nature Microbiology article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Nicole Simone Treichel, Charlie Pauvert, Joana Séneca, Petra Pjevac, David Berry, John Penders, +2 more
18citations -
White blood cell and cell-free DNA analyses for detection of residual disease in gastric cancer2020 Nature Communications article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access cited by 3 patents
Alessandro Leal, Nicole C.T. van Grieken, Doreen N. Palsgrove, Jillian A. Phallen, Jamie E. Medina, Carolyn Hruban, +25 more
250citations -
De novo whole genome assembly of the globally invasive green shore crab Carcinus maenas (Linnaeus, 1758) via long-read Oxford Nanopore MinION sequencing2025 Journal of Heredity article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Jolanda K. Brons, Thomas Hackl, Riccardo Iacovelli, Kristina Haslinger, Sébastian Lequime, Sancia E. T. van der Meij
0citations -
Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing2021 Nature Communications article Biochemistry, Genetics and Molecular Biology Genomic variations and chromosomal abnormalities Open access
Amin Allahyar, Mark Pieterse, Joost F. Swennenhuis, G. Tjitske Los-de Vries, Roos J. Leguit, Ruud W. J. Meijers, +22 more
44citations -
Genomic profiling of post-transplant lymphoproliferative disorders using cell-free DNA2023 Journal of Hematology & Oncology article Medicine Viral-associated cancers and disorders Open access
Nick Veltmaat, Yujie Zhong, Filipe Montes de Jesus, Geok Wee Tan, Johanna A.A. Bult, Martijn M. Terpstra, +13 more
15citations -
First report of mitochondrial COI in foraminifera and implications for DNA barcoding2021 Scientific Reports article Biochemistry, Genetics and Molecular Biology Protist diversity and phylogeny Open access
Jan‐Niklas Macher, Jeremy G. Wideman, Elsa B. Girard, Anouk Langerak, Elza J. Duijm, Jamaluddin Jompa, +4 more
27citations -
Nanopore long-read sequencing for the critically ill facilitates ultrarapid diagnostics and urgent clinical decision making2025 European Journal of Human Genetics article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Daphne J. Smits, Federico Ferraro, Mark Drost, Herma C. van der Linde, Bianca M. de Graaf, Yolande van Bever, +37 more
9citations -
Effect of DNA methylation on inhibitor development in people with hemophilia A treated with FVIII concentrates2025 Research and Practice in Thrombosis and Haemostasis article Medicine Hemophilia Treatment and Research Open access
Shermarke Hassan, Andrea Cairo, Roberta Palla, Flora Peyvandi, Maria Elisa Mancuso, Frits Richard Rosendaal
2citations -
External Quality Assessment on Molecular Tumor Profiling with Circulating Tumor DNA-Based Methodologies Routinely Used in Clinical Pathology within the COIN Consortium2024 Clinical Chemistry article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Paul van der Leest, Pim Rozendal, John W. J. Hinrichs, Carel J.M. van Noesel, Karen Zwaenepoel, Birgit A. L. M. Deiman, +14 more
10citations -
Multi-compartment impact of micropollutants and particularly antibiotics on bacterial communities using environmental DNA at river basin-level2024 Environmental Pollution article Environmental Science Pharmaceutical and Antibiotic Environmental Impacts Open access
Pedro A. Inostroza, Gerdhard L Jessen, Feilong Li, Xiaowei Zhang, Werner Brack, Thomas Backhaus
13citations -
False negatives in GBA1 sequencing due to polymerase dependent allelic imbalance2021 Scientific Reports article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Jonas M. den Heijer, Arnoud Schmitz, Peter T. Lansbury, Valerie Cullen, Dana C. Hilt, Vincenzo Bonifati, +1 more
6citations -
Genome sequencing of the neotype strain CBS 554.65 reveals the MAT1–2 locus of Aspergillus niger2021 BMC Genomics article Biochemistry, Genetics and Molecular Biology Fungal and yeast genetics research Open access
Valeria Ellena, Sjoerd J. Seekles, Gabriel Alexander Vignolle, Arthur F. J. Ram, Matthias G. Steiger
7citations -
Clinical sequencing identifies potential actionable alterations in a high rate of urachal and primary bladder adenocarcinomas2023 Cancer Medicine article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Melinda Váradi, Nikolett T. Nagy, Henning Reis, Boris Alexander Hadaschik, Christian Niedworok, Orsolya Módos, +20 more
18citations -
Ultraviolet Mutagenesis Coupled with Next-Generation Sequencing as a Method for Functional Interrogation of Powdery Mildew Genomes2020 Molecular Plant-Microbe Interactions article Agricultural and Biological Sciences Powdery Mildew Fungal Diseases Open access
Mirna Barsoum, Stefan Kusch, Lamprinos Frantzeskakis, Ulrich Schaffrath, Ralph Panstruga
31citations -
Identifying a monozygotic twin brother as a donor of DNA in minimal, mixed forensic stains – A case example2025 Forensic Science International Genetics article Biochemistry, Genetics and Molecular Biology Forensic and Genetic Research Open access
Kristiaan J. van der Gaag, Vincent van Marion, Redmar R. van den Berg, Jerry Hoogenboom, Arnoud J. Kal, Manfred Kayser, +4 more
6citations -
Genotyping by sequencing for estimating relative abundances of diatom taxa in mock communities2023 BMC Ecology and Evolution article Environmental Science Environmental DNA in Biodiversity Studies Open access
Ozan Çiftçi, Cornelis A. M. Wagemaker, Adrienne Mertens, Peter M. van Bodegom, Walter Pirovano, Barbara Gravendeel
2citations -
Competition between homologous chromosomal DNA and exogenous donor DNA to repair CRISPR/Cas9-induced double-strand breaks in Aspergillus niger2024 Fungal Biology and Biotechnology article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Selina Forrer, Mark Arentshorst, Prajeesh Kooloth-Valappil, Jaap Visser, Arthur F. J. Ram
0citations -
Profiling (placental) DNA methylation in cell-free DNA across gestation: the Rotterdam Periconception Cohort2025 Molecular Human Reproduction article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Marjolein M. van Vliet, Ruben Boers, Joachim Boers, Olivier J. M. Schäffers, Lotte E. van der Meeren, Joost H. Gribnau, +2 more
7citations -
Genomic survey sequencing and complete mitochondrial genome of the elkhorn coral crab Domecia acanthophora (Desbonne in Desbonne & Schramm, 1867) (Decapoda: Brachyura: Domeciidae)2023 Journal of Crustacean Biology article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Henrique Bravo, Juan Antonio Baeza, Sancia E. T. van der Meij
4citations