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GraphHDBSCAN*: Graph-based Hierarchical Clustering on High Dimensional Single-cell RNA Sequencing Data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Seyed Ardalan Ghoreishi, Aleksandra Szmigiel, James Shiniti Nagai, Ivan G. Costa, Arthur Zimek, Ricardo J. G. B. Campello
1citations -
A graph-based approach to variant description extraction from sequences2025 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Mark Santcroos, Walter A. Kosters, Mihai Lefter, Jeroen F. J. Laros, Jonathan K. Vis
0citations -
Advanced Northern Tracks Selection using a Graph Convolutional Neural Network for the IceCube Neutrino Observatory2025 International Cosmic Ray Conference conference-paper Physics and Astronomy Neutrino Physics Research Open access
Philipp Soldin, M. Ackermann, Jenni Adams, Sanjib Kumar Agarwalla, Juanan Aguilar, M. Ahlers, +91 more
0citations -
Graph Construction for Uncrewed Convertiplanes Incorporating Operational Risk Using Geospatial Data2026 International Conference on Control, Decision and Information Technologies (CoDIT) conference-paper Engineering Air Traffic Management and Optimization Open access
Philipp Hermann Müller, Florian Knaak, Rafael Godinho Ferreira, Nicolai Voget, Dieter Moormann
0citations -
Graph neural networks for surfactant multi-property prediction2024 Colloids and Surfaces A Physicochemical and Engineering Aspects article Chemistry Surfactants and Colloidal Systems Open access cited by 1 patent
Christoforos Brozos, Jan G. Rittig, Elie Akanny, Christina Kohlmann, Alexander Mitsos
30citations -
Predicting the Temperature Dependence of Surfactant CMCs Using Graph Neural Networks2024 Journal of Chemical Theory and Computation article Chemistry Surfactants and Colloidal Systems Open access cited by 1 patent
Christoforos Brozos, Jan G. Rittig, Elie Akanny, Christina Kohlmann, Alexander Mitsos
21citations -
GraphComm predicts cell cell communication using a graph based deep learning method in single cell RNA sequencing data2025 Scientific Reports article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Emily So, Sikander Hayat, Sisira Kadambat Nair, Bo Wang, Benjamin Haibe‐Kains
19citations -
GraphXForm: graph transformer for computer-aided molecular design2025 Digital Discovery article Pharmacology, Toxicology and Pharmaceutics Computational Drug Discovery Methods Open access
Jonathan Pirnay, Jan G. Rittig, Alexander Wolf, Martin Grohe, Jakob Burger, Alexander Mitsos, +1 more
15citations -
Graph-based feature extraction on object-centric event logs2023 International Journal of Data Science and Analytics article Business, Management and Accounting Business Process Modeling and Analysis Open access
Alessandro Berti, Johannes Günter Herforth, Mahnaz Sadat Qafari, Wil M. P. van der Aalst
15citations -
GraphComm: A Graph-based Deep Learning Method to Predict Cell-Cell Communication in single-cell RNAseq data2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Emily So, Sikander Hayat, Sisira Kadambat Nair, Bo Wang, Benjamin Haibe‐Kains
13citations