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The Interplay between Gut Microbiota and Diet-Induced Kidney Protection2026 Kidney360 article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Francisco Lopes, Daniel Martínez‐Martínez, Martin Richard Späth, Karla Johanna Ruth Hoyer-Allo, Sebastian Strubl, Sadrija Cukoski, +12 more
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Systematic comparison of temporal hepatotoxicant-induced gene network responses across 3 liver test systems2026 Toxicological Sciences article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Tamara Y Danilyuk, Marou Schouten, Elsje J Burgers, Barira Islam, Joost B. Beltman, Peter Bouwman, +2 more
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Systematic assessment of transcriptomic and phenotypic biological profiling for mechanism-based hazard assessment using target-annotated reference chemicals in renal proximal tubular epithelial cells2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Computational Drug Discovery Methods Open access
Hugo W van Kessel, Marlene Wedler, Palle Steen Helmke, Dace Zigure, Stephen Ferguson, Joshua Harrill, +5 more
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Proteomics of human cancer-associated T cells identifies regulators of T cell functionality2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Kaspar Bresser, Žan Hozjan, Nila H. Servaas, Suzan Stelloo, Cornelia G. Spruijt, Maia Nestor Martin, +16 more
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Multimodal analysis unveils tumor microenvironment heterogeneity linked to immune activity and evasion2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Óscar Lapuente-Santana, Gregor Sturm, Markus Außerhofer, Constantin Zackl, Maria Zopoglou, Nicholas McGranahan, +5 more
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Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury2026 Nature Communications article Neuroscience Neuroinflammation and Neurodegeneration Mechanisms Open access
Katrine Dahl Bjørnholm, H. Li, G. Mocci, W. Shao, E. Baldisseri, S. B. Rao, +17 more
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794 CD163+ macrophages are an effective target for antitumor therapy2025 Regular and Young Investigator Award Abstracts conference-abstract Immunology and Microbiology Immune cells in cancer Open access
Pieter J. Schol, Maarten K. Nijen Twilhaar, Camilla Labrie, Roderick C. Slieker, Jonas Heilskov Graversen, Anders Etzerodt, +2 more
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The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells
Roderick C. Slieker, Ziena Abdulrahman, Saskia J A M Santegoets, Mariëtte I.E. van Poelgeest, Marij J.P. Welters, Sjoerd H. van der Burg
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An integrated multimodal pan-organ atlas of the female reproductive system across the lifespan contextualises gynaecological pathologies2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Celeste E Cohen, Antonio Párraga-Leo, Leticia Rodríguez-Montes, Christina E. Kim, Marie Moullet, Ana Paredes, +49 more
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Genetic modulation of immune gene co-expression in the aged mouse hippocampus by the Apbb1ip locus2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neuroinflammation and Neurodegeneration Mechanisms Open access
James E. Tomkins, Aditi Methi, Gerard A. Bouland, Birte Doludda, Kitty B. Murphy, Jeremy A. Miller, +2 more
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Consistent changes in global gene expression patterns despite strong variation in individual gene expression in the male mouse hippocampus following early life stress
Jeniffer Sanguino‐Gómez, Jacobus C. Buurstede, Eduardo Henrique de Lima Umeoka, Marcia Santos da Silva Umeoka, Max Gentenaar, Norberto Garcia‐Cairasco, +6 more
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962 Single-cell spatial in situ transcriptomics unravels vulvar HSIL composition associated with complete response to therapeutic vaccination2023 Regular and Young Investigator Award Abstracts conference-abstract Medicine Cervical Cancer and HPV Research Open access
Ziena Abdulrahman, Mariëtte I.E. van Poelgeest, Marij J.P. Welters, Sjoerd van der Burg
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Kidney Organoid Transplantation Promotes Endothelial Cell Proliferation and Transition Toward a Human Fetal Arterial/Afferent Arteriolar-Like Phenotype2023 Journal of the American Society of Nephrology conference-abstract Biochemistry, Genetics and Molecular Biology Renal and related cancers
Sébastien J. Dumas, Marije Koning, Elda Meta, Ellen Lievers, Mila Borri, Yonglun Luo, +4 more
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Trefoil Factor‐3 Is a Hypoxia‐Triggered Pro‐Tumorigenic Factor in Hepatoblastoma2026 Liver International article Medicine Hepatocellular Carcinoma Treatment and Prognosis Open access
Luz Andrea Martínez‐Pérez, M. Ujue Latasa, Iker Uriarte, Amaya López-Pascual, Jasmin Elurbide, Pavel Strnad, +19 more
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