Papers matching “transcriptomic data analysis” 303
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Exploring pathway interactions to detect molecular mechanisms of disease: 22q11.2 deletion syndrome2023 Orphanet Journal of Rare Diseases article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Woosub Shin, Martina Kutmon, Eleni Mina, Thérèse van Amelsvoort, Chris T. Evelo, Friederike Ehrhart
2citations -
Constraint-based modelling of metabolic dysregulation in Gaucher disease: mitochondrial dysfunction and disrupted cholesterol homeostasis2026 Orphanet Journal of Rare Diseases article Medicine Lysosomal Storage Disorders Research Open access
Yanjun Liu, Xi Luo, Samira Ranjbar, Johannes M. F. G. Aerts, Martijn van der Lienden, Andrea Dardis, +1 more
2citations -
DDR1 Regulates Femoral Arterial Calcification in Lower‐Extremity Artery Disease Through NF ‐Kappa B Activation2025 Acta Physiologica article Biochemistry, Genetics and Molecular Biology Dermatological and Skeletal Disorders Open access
Manovriti Thakur, Thibaut Quillard, Nico Angliker, Mark Siegrist, Yvonne J. F. M. Jansen, Yi Yan, +8 more
1citations -
Mixed acid fermentation products from Lachnospira eligens counteract myotube atrophy2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Sophie Lecop, Edwige Piron, Audrey M. Neyrinck, Axelle E. Loriot, Sarah A. Pötgens, Raphaël Helaers, +12 more
0citations -
Single-Nucleus RNA Sequencing Reveals Sex-Specific Renoprotective Mechanisms in Diabetic Kidney Disease2024 Journal of the American Society of Nephrology article Medicine Chronic Kidney Disease and Diabetes
Shuya Liu, Tianran Zhang, Shun Yan Lu, Martin Strauch, Michaël Goedertier, Ivan G. Costa, +3 more
0citations -
Sweet but toxic? An ecotoxicity assessment of the artificial sweetener sucralose using transcriptomics2026 Zenodo (CERN European Organization for Nuclear Research) dataset Environmental Science Environmental Toxicology and Ecotoxicology Open access
Alexandra Loll, Annika Heinrich, Fabian Essfeld, Henner Hollert, Benedikt Ringbeck, Sebastian Eilebrecht
0citations -
Cell DiffErential Expression by Pooling (CellDEEP) highlights issues in differential gene expression in scRNA-seq2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yiyi Cheng, Toby Kettlewell, Ross F Laidlaw, Olympia M Hardy, Andrew McCluskey, Thomas D. Otto, +1 more
0citations -
Cell DiffErential Expression by Pooling (CellDEEP) highlights issues in differential gene expression in scRNA-seq2026 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yiyi Cheng, Toby Kettlewell, Ross F Laidlaw, Olympia M Hardy, A. McCluskey, Thomas D. Otto, +1 more
0citations -
OP0018 Characterizing ANCA-specific B cells in ANCA-associated Vasculitis Patients2025 Annals of the Rheumatic Diseases conference-abstract Medicine Vasculitis and related conditions Open access
Laura S. van Dam, Mengrui Zhang, Shima Parsafar, Audra L. Horomanski, Sajede Rasouli, Orr Sharpe, +5 more
0citations -
Sex Differences in Skeletal Muscle Pathology in Patients With Heart Failure and Reduced Ejection Fraction2024 Circulation Heart Failure article Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Nathanael Wood, Annabel J. Critchlow, Chew Weng Cheng, Sam Straw, Paul William Hendrickse, Marcelo G. Pereira, +5 more
15citations -
Transcriptional landscape of mitochondrial electron transport chain inhibition in renal cells2023 Cell Biology and Toxicology article Biochemistry, Genetics and Molecular Biology Mitochondrial Function and Pathology Open access
Giada Carta, Wanda van der Stel, Emma W. J. Scuric, Liliana Capinha, Johannes Delp, Susanne Hougaard Bennekou, +5 more
8citations -
A novel colony‐stimulating factor 1 (CSF1) translocation involving human endogenous retroviral element in a tenosynovial giant cell tumor2022 Genes Chromosomes and Cancer article Medicine Musculoskeletal synovial abnormalities and treatments Open access
Astrid Lipplaa, Debora M. Meijer, Michiel A. J. van de Sande, Hans A. J. Gelderblom, Judith V.M.G. Bovée, Hailiang Mei, +1 more
7citations -
Kynurenine and NAD+ Pathways are Associated with Macrophage Content and Polarization in Carotid Plaques2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Charlotte J. Teunis, Lobke F. Zijlstra, Johannes H.M. Levels, Kasper Tore Vinten, Maria M. Trętowicz, Barend M. Mol, +9 more
1citations -
EchoGO: Traceable Functional Interpretation Across Annotation Contexts2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Camilo Escobar-Sierra, Felix Langschied, Angelina Miller, Pedro A. Inostroza
0citations