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The shared frameshift mutation landscape of microsatellite-unstable cancers suggests immunoediting during tumor evolution2020 Nature Communications article Medicine Genetic factors in colorectal cancer Open access cited by 1 patent
Alexej Ballhausen, Moritz Jakob Przybilla, Michael Adrian Jendrusch, Saskia Haupt, Elisabeth Pfaffendorf, Florian Seidler, +24 more
138citations -
Oropharyngeal cancer cell evolution in the context of tumor-specific immunity2026 Zenodo (CERN European Organization for Nuclear Research) dataset Medicine Cancer Immunotherapy and Biomarkers Open access
Roderick Slieker, Saskia J A M Santegoets, Nynke Damstra, Sanne Boekestijn, Marij J.P. Welters, Sjoerd H. van der Burg
0citations -
Oropharyngeal cancer cell evolution in the context of tumor-specific immunity2026 Zenodo (CERN European Organization for Nuclear Research) dataset Medicine Cancer Immunotherapy and Biomarkers Open access
Roderick C. Slieker, Saskia J A M Santegoets, Nynke Damstra, Sanne Boekestijn, Marij J.P. Welters, Sjoerd H. van der Burg
0citations -
Spatial structure governs the mode of tumour evolution2021 Nature Ecology & Evolution article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Robert Noble, Dominik Bürri, Cécile Le Sueur, Jeanne Lemant, Yannick Viossat, Jakob Nikolas Kather, +1 more
126citations -
Inferring clonal composition from multiple tumor biopsies2020 Zurich Open Repository and Archive (University of Zurich) article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Matteo Manica, Hyunjae Ryan Kim, Roland Mathis, Philippe Chouvarine, Dorothea Rutishauser, Bence Szalai, +10 more
7citations -
Inferring clonal composition from multiple tumor biopsies2020 npj Systems Biology and Applications article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Matteo Manica, Hyunjae Ryan Kim, Roland Mathis, Philippe Chouvarine, Dorothea Rutishauser, Laura De Vargas Roditi, +11 more
0citations -
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells2021 Genome Medicine article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Shadi Darvish Shafighi, Szymon M. Kiełbasa, Julieta Sepúlveda-Yáñez, Ramin Monajemi, Davy Cats, Hailiang Mei, +5 more
10citations -
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Shadi Darvish Shafighi, Szymon M. Kiełbasa, Julieta Sepúlveda-Yáñez, Ramin Monajemi, Davy Cats, Hailiang Mei, +5 more
4citations -
Natural Killer Cell–Mediated Cytotoxicity Shapes the Clonal Evolution of B-cell Leukemia2024 Cancer Immunology Research article Immunology and Microbiology Immune Cell Function and Interaction Open access
Michelle C. Buri, Mohamed R. Shoeb, Aleksandr Bykov, Peter Repiščák, Hayeon Baik, Alma Dupanovic, +18 more
3citations -
Evolution of bone lesions in adults with chronic nonbacterial osteitis (CNO): A long-term follow-up study2025 Seminars in Arthritis and Rheumatism article Medicine Osteomyelitis and Bone Disorders Research Open access
Anne T Leerling, Christophe J. Weizenbach, Ana Navas Cañete, Olaf M. Dekkers, Elizabeth Martha Winter
3citations -
Evolution of Bone Lesions in Adults with Chronic Nonbacterial Osteitis (Cno): A Long-Term Follow-Up Study2024 SSRN Electronic Journal preprint Medicine Osteomyelitis and Bone Disorders Research Open access
Anne T Leerling, Christophe J. Weizenbach, Ana Navas-Cañete, Olaf M. Dekkers, Liesbeth Winter
1citations -
Resolving the immune response across clonal cancer evolution in situ with Atera whole transcriptome profiling2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Maarten van der Linde, Chunfang Zhu, Robert B. West, David G.P. van IJzendoorn, Magdalena Matusiak
1citations -
Technologic (R)Evolution Leads to Detection of More Sentinel Nodes in Patients with Melanoma in the Head and Neck Region2021 Journal of Nuclear Medicine article Medicine Cutaneous Melanoma Detection and Management Open access
Danique M.S. Berger, Nynke S. van den Berg, Vincent van der Noort, Bernies van der Hiel, Renato Alfredo Valdés Olmos, Tessa Buckle, +10 more
10citations -
Temporal and spatial composition of the tumor microenvironment predicts response to immune checkpoint inhibition2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Noah F. Greenwald, Iris Nederlof, Daisy Yi Ding, Seongyeol Park, Alex Kong, Kathleen E. Houlahan, +29 more
7citations -
CD3 aptamers promote expansion and persistence of tumor-reactive T cells for adoptive T cell therapy in cancer2024 Molecular Therapy — Nucleic Acids article Medicine CAR-T cell therapy research Open access cited by 3 patents
Ashwathi Puravankara Menon, Helena Villanueva, Daniel Meraviglia-Crivelli, Hisse M. van Santen, Joschka Hellmeier, Angelina Zheleva, +9 more
7citations