Papers matching “substrate binding pocket” 17
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KnowVolution of an Efficient Polyamidase through Molecular Dynamics Simulations of Incrementally Docked Oligomeric Substrates2025 ChemSusChem article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Hendrik Puetz, Alexander-Maurice Illig, Mariia Vorobii, Christoph Janknecht, Francisca Contreras, Fabian Flemig
9citations -
KnowVolution of an efficient polyamidase through molecular dynamics simulations of incrementally docked oligomeric substrates2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Hendrik Puetz, Alexander-Maurice Illig, Mariia Vorobii, Christoph Janknecht, Francisca Contreras, Fabian Flemig, +1 more
1citations -
Dynamical Signatures of Thermotoga maritima Maltose-Binding Proteins Affected by Ligand Binding2025 ACS Omega article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Shantanu P. Shukla, Laura R. Stingaciu, Christopher B. Stanley, Pratul K. Agarwal, Matthew J. Cuneo, Andreas Maximilian Stadler, +1 more
2citations -
Structure of human spermine oxidase in complex with a highly selective allosteric inhibitor2022 Communications Biology article Biochemistry, Genetics and Molecular Biology Polyamine Metabolism and Applications Open access cited by 1 patent
Elsie Diaz, Suraj Adhikary, Armand W.J.W. Tepper, Daniel Riley, Rodrigo F. Ortiz‐Meoz, Daniel J. Krosky, +12 more
11citations -
Inhibitors of the 20S proteasome β5 subunit as potent and selective agents against Trichomonas vaginalis2025 Antimicrobial Agents and Chemotherapy article Immunology and Microbiology Reproductive tract infections research Open access
Yukiko Miyamoto, Brianna M. Hurysz, Pavla Fajtová, Peter Eckmann, Mateus Sá Magalhães Serafim, Thales Kronenberger, +9 more
1citations -
Reversal of Regioselectivity in Zinc‐Dependent Medium‐Chain Alcohol Dehydrogenase from Rhodococcus erythropolis toward Octanone Derivatives2020 ChemBioChem article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access cited by 1 patent
Gaurao V. Dhoke, Yunus Ensari, Dinc Yasat Hacibaloglu, Anna Gärtner, Anna Joëlle Ruff, Marco Bocola, +1 more
8citations -
CellEKT: A Robust Chemical Proteomics Workflow to Profile Cellular Target Engagement of Kinase Inhibitors2025 Molecular & Cellular Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access
Joel Rüegger, Berend Gagestein, Antonius P. A. Janssen, Alexandra Valeanu, Alger Lazo Mori, Marielle van der Peet, +16 more
9citations -
CellEKT: A robust chemical proteomics workflow to profile cellular target engagement of kinase inhibitors2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Chemistry Advanced Proteomics Techniques and Applications Open access
Joel Rüegger, Berend Gagestein, Antonius P. A. Janssen, Alexandra Valeanu, Alger Lazo Mori, Marielle van der Peet, +16 more
1citations -
Modifications of the Prothrombin Active Site S4 Subpocket Confer Resistance to Dabigatran2025 Thrombosis and Haemostasis article Medicine Blood Coagulation and Thrombosis Mechanisms Open access
Viola J.F. Strijbis, Ka Lei Cheung, Dejvid Veizaj, Tessa A. Rutten, Boris Bruin, Pieter H. Reitsma, +2 more
1citations -
Rational evolution of a recombinant DNA polymerase for efficient incorporation of unnatural nucleotides by dual-site boosting2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Ruyin Cao, Lili Zhai, Qingqing Xie, Zi Wang, Yue Zheng, Wenwei Zhang, +5 more
0citations -
Reaction mechanism of the farnesyl pyrophosphate C-methyltransferase towards the biosynthesis of pre-sodorifen pyrophosphate by Serratia plymuthica 4Rx132021 Scientific Reports article Biochemistry, Genetics and Molecular Biology Plant biochemistry and biosynthesis Open access
Marie Chantal Lemfack, Wolfgang Brandt, Katja Krüger, Alexandra Gurowietz, Jacky Djifack, Jan-Philip Jung, +5 more
20citations -
Investigating Enzyme Function by Geometric Matching of Catalytic Motifs2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
2citations -
Investigating enzyme function by geometric matching of catalytic motifs2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
0citations -
Investigating enzyme function by geometric matching of catalytic motifs2026 Protein Science article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
R. Hackett, Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
0citations
17 results