Papers matching “multiplexed tissue imaging” 29
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Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging2023 Nature Methods article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ellen M. Quardokus, Diane C. Saunders, Elizabeth McDonough, John W. Hickey, Christopher Werlein, Christine Surrette, +32 more
47citations -
A collection of datasets from Publication: Organ Mapping Antibody Panels (OMAPs): A community resource for standardized multiplexed tissue imaging2025 The Human BioMolecular Atlas Program (HuBMAP) other Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ellen M. Quardokus, John W. Hickey, Anna Martinez Casals, Frida Björklund, Garry P. Nolan, Werner Müller, +4 more
0citations -
Integrating multiplex immunofluorescent and mass spectrometry imaging to map myeloid heterogeneity in its metabolic and cellular context2022 Cell Metabolism article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Pieter Goossens, Chang Wei Lu, Jianhua Cao, Marion J. Gijbels, Joël Karel, Erwin Wijnands, +11 more
56citations -
Iterative Bleaching Extends Multiplexity (IBEX) Knowledge-Base2023 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Advanced Fluorescence Microscopy Techniques Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +26 more
0citations -
Spatial multi-omics in whole skeletal muscle reveals complex tissue architecture2024 Communications Biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Clara Martínez Mir, Paola Pisterzi, Isabel de Poorter, Maria Rilou, Melissa van Kranenburg, Bram Heijs, +3 more
18citations -
Iterative Bleaching Extends Multiplexity (IBEX) Knowledge-Base2025 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Advanced Fluorescence Microscopy Techniques Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +27 more
4citations -
The IBEX Knowledge-Base: Achieving more together with open science2024 PubMed preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Andrea J. Radtke, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +52 more
1citations -
Distinct morphological features of malignant cells in large B-cell lymphoma identified by soft-segmentation in imaging-based spatial proteomics2025 Blood conference-abstract Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Troy Noordenbos, Marieke E. Ijsselsteijn, Noel de Miranda, Joost S.P. Vermaat, Mohammad Shahrokh Esfahani
0citations -
Analyzing cell-type-specific dynamics of metabolism in kidney repair2022 Nature Metabolism article Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Gangqi Wang, Bram Heijs, Sarantos Kostidis, Ahmed Essam Mahfouz, Rosalie G. J. Rietjens, Roel Bijkerk, +8 more
182citations -
1053 Identification of distinct immune landscapes of infiltrating T cells in colon cancer using multiplex immunofluorescence staining2022 Regular and Young Investigator Award Abstracts conference-abstract Medicine Cancer Immunotherapy and Biomarkers Open access
Hehuan Zhu, Jessica P Roelands, Imke Stouten, Rachel Hoorntje, Ronald L. P. van Vlierberghe, Marieke E. Ijsselsteijn, +5 more
1citations -
Quantitative assessment of inflammatory infiltrates in kidney transplant biopsies using multiplex tyramide signal amplification and deep learning2021 Laboratory Investigation article Computer Science AI in cancer detection Open access cited by 1 patent
Meyke Hermsen, Valery Volk, Jan Hinrich Bräsen, Daan J. Geijs, Wilfried Gwinner, Jesper Kers, +9 more
42citations -
Pathology-oriented multiplexing enables integrative disease mapping2025 Nature article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Gabriele Gut, Marco Prinz, Hermann‐Josef Gröne, Alexandre Karras, Patrick Bruneval, Pierre‐Louis Tharaux, +4 more
0citations -
AI-powered virtual tissues from spatial proteomics for clinical diagnostics and biomedical discovery2025 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Johann Wenckstern, Eeshaan Jain, Kiril Vasilev, Matteo Pariset, Phil Fang Cheng, Olivier Alain Michielin, +3 more
10citations -
Pre-existing inflammatory immune microenvironment predicts the clinical response of vulvar high-grade squamous intraepithelial lesions to therapeutic HPV16 vaccination2020 Journal for ImmunoTherapy of Cancer article Medicine Cervical Cancer and HPV Research Open access cited by 1 patent
Ziena Abdulrahman, Noel F.C.C. de Miranda, Edith M.G. van Esch, Peggy J. de Vos van Steenwijk, Hans W. Nijman, Marij J.P. Welters, +2 more
36citations -
Temporal and spatial composition of the tumor microenvironment predicts response to immune checkpoint inhibition2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Noah F. Greenwald, Iris Nederlof, Daisy Yi Ding, Seongyeol Park, Alex Kong, Kathleen E. Houlahan, +29 more
7citations -
Proteomic subtyping highlights tumor heterogeneity of human HCC2025 Archiv für Pathologische Anatomie und Physiologie und für Klinische Medicin article Medicine Hepatocellular Carcinoma Treatment and Prognosis Open access
Jovan Tanevski, Jana Baues, Sven Heiko Loosen, Tom Luedde, Ulf P. Neumann, Peter Boor, +3 more
1citations -
59 Bispecific antibody ubamatamab elicits patient-specific anti-tumor and immune responses in an ex vivo ovarian cancer platform2025 Regular and Young Investigator Award Abstracts conference-abstract Medicine Ovarian cancer diagnosis and treatment Open access
Felix M. Behr, Esmee Koedoot, Timothy J. P. Sijsenaar, Léa Le Large, Cor Doede de Kroon, Anne M. van Altena, +6 more
0citations