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Small-Molecule Activity-Based Probe for Monitoring Ubiquitin C-Terminal Hydrolase L1 (UCHL1) Activity in Live Cells and Zebrafish Embryos2020 Journal of the American Chemical Society article Biochemistry, Genetics and Molecular Biology Ubiquitin and proteasome pathways Open access
Raymond Kooij, Sijia Liu, Ayşegül Sapmaz, Bo‐Tao Xin, George M. C. Janssen, Peter A. van Veelen, +3 more
79citations -
The development of a broad-spectrum retaining β-exo-galactosidase activity-based probe2023 Organic & Biomolecular Chemistry article Medicine Lysosomal Storage Disorders Research Open access
C.J. Kuo, Qin Su, Adrianus M. C. H. van den Nieuwendijk, Thomas J. M. Beenakker, Wendy A. Offen, Lianne I. Willems, +9 more
6citations -
Synthesis of broad-specificity activity-based probes for exo -β-mannosidases2021 Organic & Biomolecular Chemistry article Chemistry Carbohydrate Chemistry and Synthesis Open access
Nicholas G. S. McGregor, C.J. Kuo, Thomas J. M. Beenakker, Chun-Sing Wong, Wendy A. Offen, Zachary Armstrong, +5 more
14citations -
Application of a Highly Selective Cathepsin S Two-step Activity-Based Probe in Multicolor Bio-Orthogonal Correlative Light-Electron Microscopy2021 Frontiers in Chemistry article Biochemistry, Genetics and Molecular Biology Protease and Inhibitor Mechanisms Open access
Floris J. van Dalen, Thomas Bakkum, Tyrza van Leeuwen, Mirjam G. J. Groenewold, Edgar Deu, Abraham J. Koster, +2 more
13citations -
Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining α- l -Arabinofuranosidases2020 Journal of the American Chemical Society article Chemistry Carbohydrate Chemistry and Synthesis Open access
Nicholas G. S. McGregor, Marta Artola, Alba Nin‐Hill, Daniël Linzel, Mireille Haon, Jos Reijngoud, +9 more
50citations -
Bespoke Activity-Based Probes Reveal that the Pseudomonas aeruginosa Endoglycosidase, PslG, Is an Endo-β-glucanase2025 Journal of the American Chemical Society article Biochemistry, Genetics and Molecular Biology Bacterial biofilms and quorum sensing Open access
Gijs Ruijgrok, Wendy A. Offen, Isabelle B. Pickles, Deepa Raju, Thanasis Patsos, Casper de Boer, +13 more
7citations -
STA‐55, an Easily Accessible, Broad‐Spectrum, Activity‐Based Aldehyde Dehydrogenase Probe2020 ChemBioChem article Biochemistry, Genetics and Molecular Biology Enzyme function and inhibition Open access
Sebastiaan T. A. Koenders, Eva J. van Rooden, Hans van den Elst, Bogdan I. Florea, Herman S. Overkleeft, Mario van der Stelt
9citations -
Detection of Sulfoquinovosidase Activity in Cell Lysates Using Activity‐Based Probes2024 Angewandte Chemie International Edition article Chemistry Carbohydrate Chemistry and Synthesis Open access
Zirui Li, Isabelle B. Pickles, Mahima Sharma, Benjamin Melling, Luise Pallasdies, Jeroen D. C. Codée, +3 more
3citations -
Selection and enrichment of microbial species with an increased lignocellulolytic phenotype from a native soil microbiome by activity-based probing2023 ISME Communications article Environmental Science Microbial Community Ecology and Physiology Open access
Nicholas J. Reichart, Andrea K. Steiger, Elise M. Van Fossen, Ryan McClure, Herman S. Overkleeft, Aaron Wright
18citations -
Precision Activity‐Based α‐Amylase Probes for Dissection and Annotation of Linear and Branched‐Chain Starch‐Degrading Enzymes2024 Angewandte Chemie International Edition article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Isabelle B. Pickles, Yurong Chen, Olga V. Moroz, Haley A. Brown, Casper de Boer, Zachary Armstrong, +6 more
10citations -
Precision Activity‐Based α‐Amylase Probes for Dissection and Annotation of Linear and Branched‐Chain Starch‐Degrading Enzymes2024 Angewandte Chemie article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Isabelle B. Pickles, Yurong Chen, Olga V. Moroz, Haley A. Brown, Casper de Boer, Zachary Armstrong, +6 more
0citations -
Activity-based protein profiling reveals dynamic substrate-specific cellulase secretion by saprotrophic basidiomycetes2022 Biotechnology for Biofuels and Bioproducts article Engineering Biofuel production and bioconversion Open access
Nicholas G. S. McGregor, Casper de Boer, Mikhaaeel Santos, Mireille Haon, David Navarro, Sybrin P. Schröder, +3 more
11citations -
Activity-Based Protein Profiling Identifies an α-Amylase Family Protein Contributing to the Virulence of Methicillin-Resistant Staphylococcus aureus2025 ACS Infectious Diseases article Medicine Antimicrobial Resistance in Staphylococcus Open access
Md Jalal Uddin, Kjersti Julin, Herman S. Overkleeft, Mona Johannessen, Christian Stephan Lentz
1citations -
Activity-Based Protein Profiling for the Identification of Novel Carbohydrate-Active Enzymes Involved in Xylan Degradation in the Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1E2022 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Enzyme Production and Characterization Open access
Thomas Klaus, Sabrina Ninck, Andreas Albersmeier, Tobias Busche, Daniel Wibberg, Jianbing Jiang, +9 more
16citations -
Activity-Based Protein Profiling of Retaining α-Amylases in Complex Biological Samples2021 Journal of the American Chemical Society article Chemistry Carbohydrate Chemistry and Synthesis Open access cited by 3 patents
Yurong Chen, Zachary Armstrong, Marta Artola, Bogdan I. Florea, C.J. Kuo, Casper de Boer, +7 more
31citations