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Unveiling the ecological processes driving soil and lichen microbiome assembly along an urbanization gradient2025 npj Biofilms and Microbiomes article Environmental Science Microbial Community Ecology and Physiology Open access
Panji Cahya Mawarda, Rens van der Kaaij, Francisco Dini‐Andreote, Deniz Antonie Duijker, Michael Stech
9citations -
Selection and enrichment of microbial species with an increased lignocellulolytic phenotype from a native soil microbiome by activity-based probing2023 ISME Communications article Environmental Science Microbial Community Ecology and Physiology Open access
Nicholas J. Reichart, Andrea K. Steiger, Elise M. Van Fossen, Ryan McClure, Herman S. Overkleeft, Aaron Wright
18citations -
The combination of microplastics and glyphosate affects the microbiome of soil inhabitant Enchytraeus crypticus2025 Journal of Hazardous Materials article Environmental Science Microplastics and Plastic Pollution Open access
Huihui Yang, Guoyan Qin, Qi Zhang, Ziyao Zhang, Bingfeng Chen, Chaotang Lei, +6 more
26citations -
Understanding the ecological effects of the fungicide difenoconazole on soil and Enchytraeus crypticus gut microbiome2023 Environmental Pollution article Environmental Science Pesticide and Herbicide Environmental Studies Open access
Guoyan Qin, Qi Zhang, Ziyao Zhang, Yiling Chen, Jichao Zhu, Yaohui Yang, +2 more
23citations -
2D and 3D urban green space configurations shape airborne microbiome diversity and potential pathogen abundance2026 Urban forestry & urban greening article Environmental Science Indoor Air Quality and Microbial Exposure
Yujia Bai, Peter M. van Bodegom, Laiyi Li, Anyi Hu, Mengran Zhou, Shenghui Cui, +1 more
0citations -
Epipelagic microbiome of the Small Aral Sea: Metagenomic structure and ecological diversity2020 MicrobiologyOpen article Environmental Science Microbial Community Ecology and Physiology Open access
Madina Alexyuk, Andrey Pavlinovich Bogoyavlenskiy, Pavel Alexyuk, Yergali S. Moldakhanov, Vladimir Berezin, Ilya Digel
12citations -
Capturing the spatial structure of the benthic microbiome under an intensive aquaculture scenario in Chilean Patagonia2025 BMC Microbiology article Environmental Science Microbial Community Ecology and Physiology Open access
Ana María Zárate, Leticia Barrientos, July Z. Florez, Alejandro H. Buschmann, Iván E Pérez-Santos, Pablo Bruna, +6 more
0citations -
Understanding the Ecological Effects of the Fungicide Difenoconazole on Soil And Enchytraeus Crypticus Gut Microbiome2023 SSRN Electronic Journal preprint Environmental Science Pesticide and Herbicide Environmental Studies Open access
Guoyan Qin, Qi Zhang, Ziyao Zhang, Yiling Chen, Jichao Zhu, Yaohui Yang, +2 more
0citations -
Taxonomic and functional analyses of intact microbial communities thriving in extreme, astrobiology-relevant, anoxic sites2021 Microbiome article Environmental Science Microbial Community Ecology and Physiology Open access
Alexandra Kristin Bashir, Lisa Wink, Stefanie Duller, Petra Schwendner, Charles S. Cockell, Petra Rettberg, +22 more
25citations -
Rumen Virus Populations: Technological Advances Enhancing Current Understanding2020 Frontiers in Microbiology article Environmental Science Bacteriophages and microbial interactions Open access
Rosalind Ann Gilbert, Kathleen S. Crew, Thomas C. A. Hitch, Jessica C. A. Friedersdorff, Christopher J. Creevey, Phillip Byron Pope, +2 more
83citations -
Bacteriophages targeting protective commensals impair resistance against Salmonella Typhimurium infection in gnotobiotic mice2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Bacteriophages and microbial interactions Open access
Alexandra von Strempel, Anna S. Weiß, Johannes Wittmann, Marta Salvado Silva, Diana Ring, Esther Wortmann, +4 more
2citations -
PhenoSelection Manuscript 16S amplicons2023 OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) article Environmental Science Microbial Community Ecology and Physiology Open access
Nicholas J. Reichart, Andrea K. Steiger, Elise M. Van Fossen, Ryan McClure, Herman S Overkleeftf, Aaron Wright
0citations -
Seasonality of composition, genomic potential and activity of coniferous forest soil microbiomes2026 Scientific Data data-paper Environmental Science Microbial Community Ecology and Physiology Open access
Zander Rainier Human, Martina Štursová, Iñaki Odriozola, Tomáš Větrovský, Adina Howe, Diana Navrátilová, +21 more
0citations -
Analysing indoor mycobiomes through a large‐scale citizen science study in Norway2021 Molecular Ecology article Environmental Science Indoor Air Quality and Microbial Exposure Open access
Pedro Maria Martin-Sanchez, Eva Lena F. Estensmo, Luís Neves Morgado, Sundy Maurice, Ingeborg Bjorvand Engh, Inger Skrede, +1 more
35citations -
Species abundance correlations carry limited information about microbial network interactions2022 PLoS Computational Biology article Environmental Science Microbial Community Ecology and Physiology Open access
Susanne Pinto, Elisa Benincà, Egbert H. van Nes, Marten Scheffer, Johannes A. Bogaards
33citations -
Conclusions of low extinction risk for most species of reef-building corals are premature2022 Nature Ecology & Evolution article Environmental Science Coral and Marine Ecosystems Studies Open access
Paul Muir, David O. Obura, Bert Willem Hoeksema, Charles R C Sheppard, Michel Pichon, Zoe T. Richards
14citations -
Development and validation of an experimental life support system to study the impact of ultraviolet B radiation and temperature on coral reef microbial communities2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Coral and Marine Ecosystems Studies Open access
T.M. Stuij, Daniel F. R. Cleary, Rui J. M. Rocha, Ana R. M. Polónia, Davide Silva, Jörg C. Frommlet, +5 more
2citations -
Bacterial and fungal metabarcoding data characterizing within-canopy and within-leaf microbiota variations of three beech trees (Fagus Sylvatica) and their surrounding environment during the vegetative season of 2017.2022 Harvard Dataverse dataset Environmental Science Microbial Community Ecology and Physiology Open access
Tania Fort, Charlie Pauvert, Émilie Chancerel, Régis Burlett, Lisa Wingate, Corinne Vacher
0citations -
Antibiotic resistance genes in food production systems support One Health opinions2023 Current Opinion in Environmental Science & Health review Environmental Science Pharmaceutical and Antibiotic Environmental Impacts Open access
James M. Tiedje, Yuhao Fu, Zhi Mei, Andreas Schäffer, Qingyuan Dou, Wulf Amelung, +8 more
51citations -
Combined effects of azoxystrobin and oxytetracycline on rhizosphere microbiota of Arabidopsis thaliana2024 Environment International article Environmental Science Pesticide and Herbicide Environmental Studies Open access
Mingjing Ke, Zhitao Yu, Chaotang Lei, Meng Liu, Yaohui Yang, Tao Lu, +4 more
17citations