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Papers 31

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FAIR Digital Objects for Science: From Data Pieces to Actionable Knowledge Units
2020 Preprints.org preprint Computer Science Research Data Management Practices Open access

Koenraad De Smedt, Dimitrios Koureas, Peter Wittenburg

12

citations
plantR: An R package and workflow for managing species records from biological collections
2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Research Data Management Practices Open access

Renato A. Ferreira de Lima, Andrea Sánchez‐Tapia, Sara Ribeiro Mortara, Hans ter Steege, Marinez Ferreira de Siqueira

10

citations
Camtrap DP: An open standard for the FAIR exchange and archiving of camera trap data
2023 preprint Computer Science Research Data Management Practices Open access

Jakub W. Bubnicki, Ben Norton, Steve Baskauf, Tom Bruce, Francesca Cagnacci, Jim Casaer, +30 more

8

citations
Connecting molecular sequences to their voucher specimens
2021 preprint Computer Science Research Data Management Practices Open access

Quentin Groom, Mathias Dillen, Pieter Huybrechts, Rukaya Johaadien, Niki Kyriakopoulou, Francisco Jose Quevedo Fernandez, +1 more

8

citations
Few-shot bioacoustic event detection at the DCASE 2023 challenge
2023 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Inês Nolasco, Burooj Ghani, Shubhr Singh, Ester Vidaña-Vila, Helen Whitehead, Emily M. Grout, +9 more

6

citations
Generalization in birdsong classification: impact of transfer learning methods and dataset characteristics
2024 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Burooj Ghani, Vincent J. Kalkman, Willem-Pier Vellinga, Lisa Gill, Dan Stowell

4

citations
COOD: Combined out-of-distribution detection using multiple measures for anomaly & novel class detection in large-scale hierarchical classification
2024 arXiv (Cornell University) preprint Computer Science Adversarial Robustness in Machine Learning Open access

Laurens Hogeweg, Rajesh Gangireddy, Django Brunink, Vincent J. Kalkman, L. J. Cornelissen, Jacob W. Kamminga

2

citations
Polyphonic sound event detection for highly dense birdsong scenes
2022 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Alberto García Arroba Parrilla, Dan Stowell

2

citations
CE-VAE: Capsule Enhanced Variational AutoEncoder for Underwater Image Enhancement
2024 arXiv (Cornell University) preprint Computer Science Image Enhancement Techniques Open access

Rita Pucci, Niki Martinel

2

citations
Defining Quality Requirements for a Trustworthy AI Wildflower Monitoring Platform
2023 arXiv (Cornell University) preprint Computer Science Software Engineering Techniques and Practices Open access

Petra Heck, Gerard Schouten

1

citations
Recognizability bias in citizen science photographs
2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Advanced Neural Network Applications Open access

Wouter Koch, Laurens Hogeweg, Erlend Birkeland Nilsen, Robert Brian O’Hara, Anders Gravbrøt Finstad

1

citations
Maximizing citizen scientists’ contribution to automated species recognition
2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Advanced Neural Network Applications Open access

Wouter Koch, Laurens Hogeweg, Erlend Birkeland Nilsen, Anders Gravbrøt Finstad

1

citations
Envisaging a global infrastructure to exploit the potential of digitised collections
2022 preprint Computer Science Research Data Management Practices Open access

Quentin Groom, Mathias Dillen, Wouter Addink, Arturo H. Ariño, Pierre Bonnet, Lorenzo Cecchi, +28 more

1

citations
Comparison between transformers and convolutional models for fine-grained classification of insects
2023 Research portal (Tilburg University) preprint Computer Science Advanced Neural Network Applications Open access

Rita Pucci, Vincent J. Kalkman, Dan Stowell

1

citations
Extraction of Quantitative Specimen Data using Machine Learning as a Service in the DiSSCo Research Infrastructure
2025 preprint Computer Science Advanced Neural Network Applications Open access

Claus Weiland, Jonas Grieb, Soulaine Theocharides, Sam Leeflang, Wouter Addink, Sharif Islam

1

citations
Clustering and novel class recognition: evaluating bioacoustic deep learning feature extractors
2025 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Vincent S. Kather, Burooj Ghani, Dan Stowell

1

citations
BioDCASE: Using data challenges to make community advances in computational bioacoustics
2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Music and Audio Processing Open access

Dan Stowell, Ester Vidaña-Vila, Inês Nolasco, Ben McEwen, Lucie Jean-Labadye, Yasmine Benhamadi, +15 more

1

citations
Envisaging a global infrastructure to exploit the potential of digitised collections
2022 preprint Computer Science Research Data Management Practices Open access

Quentin Groom, Mathias Dillen, Wouter Addink, Arturo H. Ariño, Pierre Bonnet, Lorenzo Cecchi, +29 more

0

citations
Deliverable D11.2 Search and link association services: A RESTful API, which will input a link/accession number and return a ranked list of neighbours links with a confidence score
2023 preprint Computer Science Research Data Management Practices Open access

Soulaine Theocharides, Niki Kyriakopoulou

0

citations
Auto deep learning for bioacoustic signals
2023 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Giulio Tosato, Joshua Luke Janssen, Kees Kamp, Pramatya Jati, Dan Stowell

0

citations
Efficient speech detection in environmental audio using acoustic recognition and knowledge distillation
2023 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Drew Priebe, Burooj Ghani, Dan Stowell

0

citations
Mind the Domain Gap: a Systematic Analysis on Bioacoustic Sound Event Detection
2024 arXiv (Cornell University) preprint Computer Science Music and Audio Processing Open access

Jinhua Liang, Inês Nolasco, Burooj Ghani, Huy Phan, Emmanouil Benetos, Dan Stowell

0

citations
Performance of computer vision algorithms for fine-grained classification using crowdsourced insect images
2024 arXiv (Cornell University) preprint Computer Science Advanced Neural Network Applications Open access

Rita Pucci, Vincent J. Kalkman, Dan Stowell

0

citations
Data-centric AI approach for automated wildflower monitoring
2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Advanced Neural Network Applications Open access

Gerard Schouten, Bas S.H.T. Michielsen, Barbara Gravendeel

0

citations
Digital Object Interface Protocol (DOIP) enabled Digital Object repository installation to store and provide digital specimen information
2025 preprint Computer Science Research Data Management Practices Open access

Soulaine Theocharides, Sam Leeflang, Wouter Addink, Sharif Islam

0

citations