Papers matching “image processing workflow” 22
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Toward Quantitative Electrodeposition via In Situ Liquid Phase Transmission Electron Microscopy: Studying Electroplated Zinc Using Basic Image Processing and 4D STEM2024 Small Methods article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
Junbeom Park, Sarmila Dutta, Hongyu Sun, Janghyun Jo, Pranav Karanth, Dieter Weber, +13 more
17citations -
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud2024 SoftwareX software-paper Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Johannes Seiffarth, Tim Scherr, Bastian Wollenhaupt, Oliver Neumann, Hanno Scharr, Dietrich Kohlheyer, +2 more
11citations -
From Tube to Structure: SPA Cryo-EM Workflow Using Apoferritin as an Example2021 Methods in molecular biology book-chapter Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications
Christoph A. Diebolder, Rebecca S. Dillard, Ludovic L. R. Renault
5citations -
Stimulated Raman histology in the neurosurgical workflow of a major European neurosurgical center — part A2021 Neurosurgical Review article Biochemistry, Genetics and Molecular Biology Spectroscopy Techniques in Biomedical and Chemical Research Open access
Nicolas Noel Neidert, Jakob Straehle, Daniel Erny, Vlad Sacalean, Amir El Rahal, David Steybe, +9 more
37citations -
A Cryo‐to‐Liquid Phase Correlative Light Electron Microscopy Workflow for the Visualization of Biological Processes in Graphene Liquid Cells2024 Advanced Functional Materials article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
Luco Rutten, Ben Joosten, Judith M. Schaart, Marit A. de Beer, Rona Roverts, Steffen Gräber, +4 more
8citations -
Automated Characterization of Catalytically Active Inclusion Body Production in Biotechnological Screening Systems2022 Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society conference-paper Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Karina Ruzaeva, Kira Küsters, Wolfgang Wiechert, Benjamin Berkels, Marco Oldiges, Katharina Nöh
0citations -
A real-time transformer pipeline for adult-mouse cardiomyocyte viability assessment in high-throughput toxicity screening2026 Biomedical Signal Processing and Control article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Vicent Descals Carbonell, Fons Verbeek, Ilse Sophie Altenburg, Michiel Helmes, Lu Cao
0citations -
Semi-automated background removal limits loss of data and normalises the images for downstream analysis of imaging mass cytometry data2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Marieke E. Ijsselsteijn, Antonios Somarakis, Boudewijn P. F. Lelieveldt, Thomas Höllt, Noel F.C.C. de Miranda
2citations -
Automated Segmentation of Mitochondria in Virus-Infected Cells Using Deep Learning Models2023 Microscopy and Microanalysis article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Matthijs Schrage, Mario-Alin Rus, Marre Niessen, Thomas Burgoyne, Andreia Pinto
1citations -
Semi‐automated background removal limits data loss and normalizes imaging mass cytometry data2021 Cytometry Part A article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 1 patent
Marieke E. Ijsselsteijn, Antonios Somarakis, Boudewijn P. F. Lelieveldt, Thomas Höllt, Noel F.C.C. de Miranda
47citations -
ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation2022 Journal of Structural Biology article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
J. Jiménez de la Morena, Pablo Conesa, Yunior C. Fonseca, F.P. de Isidro-Gómez, David Herreros, Estrella Fernández-Giménez, +24 more
50citations -
Integration of mass cytometry and mass spectrometry imaging for spatially resolved single-cell metabolic profiling2024 Nature Methods article Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Joana B. Nunes, Marieke E. Ijsselsteijn, Tamim Abdelaal, Rick Ursem, Manon van der Ploeg, Martin A. Giera, +4 more
92citations -
A web-based dashboard for RELION metadata visualization2024 Acta Crystallographica Section D Structural Biology article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access cited by 1 patent
Nayim González-Rodríguez, Emma Areán-Ulloa, Rafael Fernández-Leiro
6citations -
Cryogenium – an Automated Blot-Free Cryo-Plunger with Optical Realtime Feedback for Single-Particle and Cell-Based Workflows2024 Microscopy and Microanalysis article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
Roman I. Koning, Abraham J. Koster, Martijn van Nugteren, Hildo Vader, Arnold C. F. Kamp, Peter A. Grocutt, +1 more
1citations -
AutoBioTech─A Versatile Biofoundry for Automated Strain Engineering2024 ACS Synthetic Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Tobias Michael Rosch, Julia Tenhaef, Till Redeker, Dominic Kösters, Niels Hollmann, Karin Krumbach, +5 more
36citations -
VitroJet: new features and case studies2024 Acta Crystallographica Section D Structural Biology article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
René Henderikx, Daniel Mann, Aušra Domanska, Jing Dong, Saba Shahzad, Behnam Lak, +11 more
11citations -
Quantitative Mapping of Keratin Networks in 3D2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Skin and Cellular Biology Research Open access
Reinhard Windoffer, Nicole Schwarz, Sungjun Yoon, Teodora Piskova, Michael Scholkemper, Johannes Stegmaier, +3 more
2citations
22 results