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October 01, 2026 software Open access Aachen paper

obophenotype/uberon: 2026-10-01 Release

Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.23083418 Full text (OA) OpenAlex

Abstract

Classes added: 70 | Term | ----| | outer muscle layer of fallopian tube intramural segment (UBERON:8930079) | | spleen subcapsular zone (UBERON:8930197) | | wall of fallopian tube infundibulum (UBERON:8930097) | | vasculature of fallopian tube infundibulum (UBERON:8930092) | | inner muscle layer of fallopian tube intramural segment (UBERON:8930048) | | serosa of fallopian tube ampulla (UBERON:8930085) | | basement membrane of fallopian tube ampulla (UBERON:8930037) | | vasculature of mesosalpinx (UBERON:8930095) | | plica of fallopian tube infundibulum (UBERON:8930082) | | mucosa of fallopian tube fimbria (UBERON:8930063) | | fluid of fallopian tube isthmus (UBERON:8930045) | | basement membrane of fallopian tube infundibulum (UBERON:8930038) | | outer muscle layer of fallopian tube infundibulum (UBERON:8930078) | | muscle layer of fallopian tube isthmus (UBERON:8930070) | | fluid of fallopian tube ampulla (UBERON:8930041) | | kidney lymphatic vessel (UBERON:8930105) | | plica of fallopian tube ampulla (UBERON:8930081) | | nerve of fallopian tube intramural segment (UBERON:8930074) | | inner muscle layer of fallopian tube ampulla (UBERON:8930046) | | mesothelium of mesosalpinx (UBERON:8930057) | | lamina propria of fallopian tube isthmus (UBERON:8930055) | | outer muscle layer of fallopian tube isthmus (UBERON:8930080) | | vasculature of fallopian tube isthmus (UBERON:8930094) | | wall of fallopian tube intramural segment (UBERON:8930098) | | inner muscle layer of fallopian tube isthmus (UBERON:8930049) | | nerve of fallopian tube fimbria (UBERON:8930072) | | outer muscle layer of fallopian tube ampulla (UBERON:8930077) | | inner mantle zone (UBERON:8930192) | | bone marrow of skull (UBERON:1200342) | | lymphatic of mesosalpinx (UBERON:8930056) | | serosa of fallopian tube isthmus (UBERON:8930088) | | mucosa of fallopian tube ampulla (UBERON:8930062) | | intramural segment of fallopian tube (UBERON:8930050) | | epithelium of tip of renal papilla (UBERON:8930106) | | outer cortex of lens (UBERON:8930001) | | nerve of fallopian tube isthmus (UBERON:8930075) | | lamina propria of fallopian tube fimbria (UBERON:8930052) | | vasculature of fallopian tube ampulla (UBERON:8930090) | | nerve of mesosalpinx (UBERON:8930076) | | inner periarterial lymphatic sheath of spleen (UBERON:8930193) | | basement membrane of fallopian tube isthmus (UBERON:8930040) | | lamina propria of fallopian tube infundibulum (UBERON:8930053) | | wall of fallopian tube ampulla (UBERON:8930096) | | nerve of fallopian tube infundibulum (UBERON:8930073) | | spleen connective tissue (UBERON:8930191) | | lamina propria of fallopian tube intramural segment (UBERON:8930054) | | superficial mantle zone (UBERON:8930198) | | nerve of fallopian tube ampulla (UBERON:8930071) | | fluid of fallopian tube infundibulum (UBERON:8930043) | | ring fiber (UBERON:8930195) | | basement membrane of fallopian tube intramural segment (UBERON:8930039) | | white pulp lymphatic vessel (UBERON:8930199) | | wall of fallopian tube isthmus (UBERON:8930099) | | inner muscle layer of fallopian tube infundibulum (UBERON:8930047) | | inner cortex of lens (UBERON:8930000) | | splenic red pulp stroma (UBERON:8930196) | | fluid of fallopian tube intramural segment (UBERON:8930044) | | vasculature of fallopian tube intramural segment (UBERON:8930093) | | plica of fallopian tube intramural segment (UBERON:8930083) | | muscle layer of fallopian tube intramural segment (UBERON:8930069) | | outer periarterial lymphatic sheath of spleen (UBERON:8930194) | | mucosa of intramural part of fallopian tube (UBERON:8930065) | | vasculature of fallopian tube fimbria (UBERON:8930091) | | lamina propria of fallopian tube ampulla (UBERON:8930051) | | muscle layer of fallopian tube ampulla (UBERON:8930067) | | bone marrow of calvaria (UBERON:1200343) | | fluid of fallopian tube fimbria (UBERON:8930042) | | serosa of fallopian tube intramural segment (UBERON:8930087) | | plica of fallopian tube isthmus (UBERON:8930084) | | mucosa of fallopian tube isthmus (UBERON:8930066) | Relationships added: 172 | Subject | Predicate | Object| ----|----|----| | Oka organ (UBERON:8480039) | RO:0002162 | NCBITaxon:197562 | | ring fiber (UBERON:8930195) | BFO:0000050 | splenic sinusoid (UBERON:0003910) | | outer muscle layer of fallopian tube infundibulum (UBERON:8930078) | subClassOf (rdfs:subClassOf) | longitudinal muscle layer of muscular coat (UBERON:0012369) | | inner muscle layer of fallopian tube isthmus (UBERON:8930049) | BFO:0000050 | isthmus of fallopian tube (UBERON:0016632) | | outer muscle layer of fallopian tube isthmus (UBERON:8930080) | subClassOf (rdfs:subClassOf) | longitudinal muscle layer of muscular coat (UBERON:0012369) | | outer cortex of lens (UBERON:8930001) | RO:0002220 | lens anterior epithelium (UBERON:0005614) | | vasculature of fallopian tube isthmus (UBERON:8930094) | subClassOf (rdfs:subClassOf) | vasculature of organ (UBERON:0006876) | | plica of fallopian tube infundibulum (UBERON:8930082) | subClassOf (rdfs:subClassOf) | mucosa of infundibulum of uterine tube (UBERON:0005049) | | outer muscle layer of fallopian tube isthmus (UBERON:8930080) | subClassOf (rdfs:subClassOf) | reproductive structure (UBERON:0005156) | | inner muscle layer of fallopian tube ampulla (UBERON:8930046) | subClassOf (rdfs:subClassOf) | circular muscle layer of muscular coat (UBERON:0012368) | | fluid of fallopian tube ampulla (UBERON:8930041) | subClassOf (rdfs:subClassOf) | bodily fluid (UBERON:0006314) | | plica of fallopian tube isthmus (UBERON:8930084) | subClassOf (rdfs:subClassOf) | oviduct mucosal fold (UBERON:0018343) | | lamina propria of fallopian tube infundibulum (UBERON:8930053) | BFO:0000050 | uterine tube infundibulum (UBERON:0003984) | | inner mantle zone (UBERON:8930192) | BFO:0000050 | spleen B cell corona (UBERON:0010421) | | fluid of fallopian tube fimbria (UBERON:8930042) | BFO:0000050 | fimbria of fallopian tube (UBERON:8410010) | | nerve of fallopian tube fimbria (UBERON:8930072) | subClassOf (rdfs:subClassOf) | pelvis nerve (UBERON:0003444) | | wall of fallopian tube infundibulum (UBERON:8930097) | subClassOf (rdfs:subClassOf) | reproductive structure (UBERON:0005156) | | lamina propria of fallopian tube intramural segment (UBERON:8930054) | subClassOf (rdfs:subClassOf) | reproductive structure (UBERON:0005156) | | wall of fallopian tube intramural segment (UBERON:8930098) | BFO:0000050 | intramural segment of fallopian tube (UBERON:8930050) | | inner muscle layer of fallopian tube intramural segment (UBERON:8930048) | BFO:0000050 | muscle layer of fallopian tube intramural segment (UBERON:8930069) | | plica of fallopian tube intramural segment (UBERON:8930083) | subClassOf (rdfs:subClassOf) | oviduct mucosal fold (UBERON:0018343) | | nerve of fallopian tube infundibulum (UBERON:8930073) | subClassOf (rdfs:subClassOf) | nerve (UBERON:0001021) | | white pulp lymphatic vessel (UBERON:8930199) | BFO:0000050 | white pulp of spleen (UBERON:0001959) | | mucosa of fallopian tube ampulla (UBERON:8930062) | subClassOf (rdfs:subClassOf) | mucosa of fallopian tube (UBERON:0005048) | | muscle layer of fallopian tube isthmus (UBERON:8930070) | subClassOf (rdfs:subClassOf) | muscle layer of oviduct (UBERON:0006642) | | vasculature of fallopian tube isthmus (UBERON:8930094) | subClassOf (rdfs:subClassOf) | vasculature of trunk (UBERON:0002201) | | wall of fallopian tube infundibulum (UBERON:8930097) | BFO:0000050 | uterine tube infundibulum (UBERON:0003984) | | lamina propria of fallopian tube fimbria (UBERON:8930052) | BFO:0000050 | fimbria of fallopian tube (UBERON:8410010) | | nerve of mesosalpinx (UBERON:8930076) | subClassOf (rdfs:subClassOf) | nerve (UBERON:0001021) | | vasculature of fallopian tube intramural segment (UBERON:8930093) | subClassOf (rdfs:subClassOf) | vasculature of organ (UBERON:0006876) | | kidney lymphatic vessel (UBERON:8930105) | subClassOf (rdfs:subClassOf) | lymphatic vessel (UBERON:0001473) | | outer muscle layer of fallopian tube ampulla (UBERON:8930077) | subClassOf (rdfs:subClassOf) | reproductive structure (UBERON:0005156) | | wall of fallopian tube intramural segment (UBERON:8930098) | subClassOf (rdfs:subClassOf) | wall of fallopian tube (UBERON:0036441) | | bone marrow of calvaria (UBERON:1200343) | BFO:0000050 | vault of skull (UBERON:0004339) | | basement membrane of fallopian tube infundibulum (UBERON:8930038) | subClassOf (rdfs:subClassOf) | basement membrane of epithelium (UBERON:0005769) | | lamina propria of fallopian tube isthmus (UBERON:8930055) | BFO:0000050 | isthmus of fallopian tube (UBERON:0016632) | | ring fiber (UBERON:8930195) | subClassOf (rdfs:subClassOf) | spleen connective tissue (UBERON:8930191) | | nerve of fallopian tube ampulla (UBERON:8930071) | BFO:0000050 | ampulla of fallopian tube (UBERON:0012648) | | outer cortex of lens (UBERON:8930001) | RO:0002220 | capsule of lens (UBERON:0001804) | | epithelium of tip of renal papilla (UBERON:8930106) | subClassOf (rdfs:subClassOf) | kidney epithelium (UBERON:0004819) | | wall of fallopian tube isthmus (UBERON:8930099) | BFO:0000050 | isthmus of fallopian tube (UBERON:0016632) | | outer muscle layer of fallopian tube infundibulum (UBERON:8930078) | subClassOf (rdfs:subClassOf) | reproductive structure (U

Authors 29

  1. Chris J Mungall

    Lawrence Berkeley National Laboratory

    Affiliation as printed

    Lawrence Berkeley National Laboratory

  2. Damien Goutte-Gattat

    German BioImaging – Gesellschaft für Mikroskopie und Bildanalyse

    Affiliation as printed

    German BioImaging e.V

  3. Shawn Tan
  4. Nicolas Matentzoglu
    Affiliation as printed

    semanticly.ai

  5. Aleix Puig

    European Bioinformatics Institute · European Molecular Biology Laboratory · European Molecular Biology Laboratory

    Affiliation as printed

    EBI-EMBL

  6. Meghan A. Balk

    University of Oslo

    Affiliation as printed

    Natural History Museum, University of Oslo

  7. David Osumi-Sutherland
    Affiliation as printed

    www.virtualflybrain.org

  8. PaulaDuekRoggli
  9. paolaroncaglia
  10. Nicole Vasilevsky

    Critical Path Institute

    Affiliation as printed

    Critical Path Institute

  11. Jim Balhoff

    Renaissance Computing Institute

    Affiliation as printed

    @RENCI

  12. Anita Caron
    Affiliation as printed

    ARC Semantics

  13. Bill Duncan

    University of Florida

    Affiliation as printed

    University of Florida

  14. Arwa Ibrahim
  15. Ray Stefancsik
  16. Jasmine Belfiore
  17. jie zheng

    University of Michigan

    Affiliation as printed

    University of Michigan

  18. Vassilis Virvilis

    Biovista (United States)

    Affiliation as printed

    Biovista Inc

  19. CEastwood
  20. Maria Keays
  21. Martin Larralde Aachen LUMC (ex EMBL) @zellerlab

    Leiden University Medical Center

    Affiliation as printed

    LUMC (ex EMBL) @zellerlab

  22. Charles Tapley Hoyt Aachen

    RWTH Aachen University

    Affiliation as printed

    RWTH Aachen University

  23. Harshad
  24. Dragon-AI Agent
    Affiliation as printed

    Monarch Initiative

  25. Wasila Dahdul
  26. Tom Gillespie
  27. helenamachado
  28. Yaroslav Halchenko

    Dartmouth College

    Affiliation as printed

    Dartmouth College, @dandi, @Debian, @DataLad, @neurodebian, @PyMVPA, @fail2ban

  29. Alida Avola

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