Enzyme kcat predictions and inter-method agreement analysis for the Escherichia coli iML1515 metabolic model

Zenodo (CERN European Organization for Nuclear Research)

Abstract

This dataset contains the enzyme turnover number (kcat) predictions and inter-method agreement analysis for the Escherichia coli genome-scale metabolic model iML1515, accompanying the manuscript "Accessing Enzyme Kinetic Parameter Prediction Methods at Scale" (submitted to Cell Systems).

Authors 18

1. Saleh Alwer
2. Hugues Escoffier
3. Chidi Egwu
4. Farid Zare
5. Jack McGoldrick

   Ollscoil na Gaillimhe – University of Galway

   Affiliation as printed

   Ollscoil na Gaillimhe – University of Galway

6. Ronan M. T. Fleming Aachen

   Leiden University · Ollscoil na Gaillimhe – University of Galway

   Affiliation as printed

   Ollscoil na Gaillimhe – University of Galway

   Universiteit Leiden

7. Thomas Sauter

   University of Luxembourg

   Affiliation as printed

   University of Luxembourg

8. Eduard Kerkhoven

   Chalmers University of Technology

   Affiliation as printed

   Chalmers University of Technology

9. Han Yu
10. Xiaozhou Luo
11. Costas D. Maranas

    Pennsylvania State University

    Affiliation as printed

    Pennsylvania State University

12. Veda Sheersh Boorla
13. Somtirtha Santra

    Pennsylvania State University

    Affiliation as printed

    Pennsylvania State University

14. Liangzhen Zheng
15. Wang Zechen
16. Nadine Töpfer
17. Jan-Niklas Weder
18. Karim Taha