obophenotype/uberon: Release v2026-06-23

Zenodo (CERN European Organization for Nuclear Research)

Abstract

What's Changed Nodes added to subset: 418 | Term | Subset | ----|----| | spinous process of second cervical vertebra (UBERON:1200207) | human_reference_atlas | | supraspinous fossa of scapula (UBERON:1200261) | human_reference_atlas | | vertebral arch of third thoracic vertebra (UBERON:1200309) | human_reference_atlas | | vertebral arch of eighth thoracic vertebra (UBERON:1200288) | human_reference_atlas | | intercondylar notch of femur (UBERON:1200113) | human_reference_atlas | | superior articular facet of sixth thoracic vertebra (UBERON:1200244) | human_reference_atlas | | stylomastoid foramen of petrous part of temporal bone (UBERON:1200222) | human_reference_atlas | | petrotympanic fissure of squamous part of temporal bone (UBERON:1200171) | human_reference_atlas | | sacral promontory of sacrum (UBERON:1200193) | human_reference_atlas | | foramen magnum (UBERON:0003687) | human_reference_atlas | | facial muscle (UBERON:0001577) | human_reference_atlas | | temporal fossa (UBERON:0013463) | human_reference_atlas | | muscle layer of infundibulum of uterine tube (UBERON:0007182) | human_reference_atlas | | rectus capitis anterior (UBERON:0008453) | human_reference_atlas | | head of second middle phalanx of hand (UBERON:1200071) | human_reference_atlas | | hypothenar muscle (UBERON:0014377) | human_reference_atlas | | inferior articular facet of first cervical vertebra (UBERON:1200088) | human_reference_atlas | | pterygoid fovea of mandible (UBERON:1200180) | human_reference_atlas | | cubital lymph node (UBERON:0038870) | human_reference_atlas | | obturator foramen (UBERON:0006803) | human_reference_atlas | | mammillary process of first lumbar vertebra (UBERON:1200130) | human_reference_atlas | | superior articular facet of first thoracic vertebra (UBERON:1200233) | human_reference_atlas | | auricular surface of ilium of os coxa (UBERON:1200017) | human_reference_atlas | | septal nuclear complex (UBERON:0002663) | human_reference_atlas | | inferior articular facet of seventh cervical vertebra (UBERON:1200095) | human_reference_atlas | | fibular notch of tibia (UBERON:1200043) | human_reference_atlas | | sella turcica (UBERON:0003689) | human_reference_atlas | | lunate surface of os coxa (UBERON:1200128) | human_reference_atlas | | superior articular facet of first lumbar vertebra (UBERON:1200232) | human_reference_atlas | | anterior gluteal line of ilium of os coxa (UBERON:1200010) | human_reference_atlas | | soleal line of tibia (UBERON:1200205) | human_reference_atlas | | lesser wings of sphenoid bone (UBERON:1200126) | human_reference_atlas | | transverse costal facet of third thoracic vertebra (UBERON:1200275) | human_reference_atlas | | head of ulna of ulna (UBERON:1200073) | human_reference_atlas | | intra-ocular muscle (UBERON:0011222) | human_reference_atlas | | olecranon fossa (UBERON:0012130) | human_reference_atlas | | facet of first rib (UBERON:1200039) | human_reference_atlas | | supercilary arch of frontal bone (UBERON:1200225) | human_reference_atlas | | middle nasal concha (UBERON:0005921) | human_reference_atlas | | palmar interosseous muscle of manus (UBERON:0006505) | human_reference_atlas | | lamina of second cervical vertebra (UBERON:1200122) | human_reference_atlas | | diaphragm (UBERON:0001103) | human_reference_atlas | | dentogingival junction (UBERON:8000014) | human_reference_atlas | | posterior gluteal line of ilium of os coxa (UBERON:1200174) | human_reference_atlas | | gustatory gland (UBERON:0013475) | human_reference_atlas | | anterior arch of first cervical vertebra (UBERON:1200008) | human_reference_atlas | | superior articular facet of fifth cervical vertebra (UBERON:1200228) | human_reference_atlas | | anterior inferior iliac spine (UBERON:0013709) | human_reference_atlas | | foramen ovale of sphenoid bone (UBERON:1200045) | human_reference_atlas | | tubercle of calcaneus (UBERON:7500094) | human_reference_atlas | | inferior articular facet of seventh thoracic vertebra (UBERON:1200096) | human_reference_atlas | | sternal end of ninth rib (UBERON:1200214) | human_reference_atlas | | inferior articular facet of fourth thoracic vertebra (UBERON:1200091) | human_reference_atlas | | groove for superior sagittal sinus of frontal bone (UBERON:1200062) | human_reference_atlas | | vertebral arch of second cervical vertebra (UBERON:1200299) | human_reference_atlas | | transverse costal facet of eighth thoracic vertebra (UBERON:1200265) | human_reference_atlas | | inferior articular facet of second thoracic vertebra (UBERON:1200094) | human_reference_atlas | | anterior tubercle of first cervical vertebra (UBERON:1200012) | human_reference_atlas | | vertebra prominens of seventh cervical vertebra (UBERON:1200287) | human_reference_atlas | | superior articular facet of seventh thoracic vertebra (UBERON:1200242) | human_reference_atlas | | trochlear notch (UBERON:0008449) | human_reference_atlas | | inferior articular facet of fourth cervical vertebra (UBERON:1200090) | human_reference_atlas | | vertebral arch of third cervical vertebra (UBERON:1200307) | human_reference_atlas | | superior orbital fissure (UBERON:0005480) | human_reference_atlas | | body of sphenoid bone (UBERON:1200024) | human_reference_atlas | | groove for nasopalatine nerve of vomer (UBERON:1200057) | human_reference_atlas | | non-articular facet of tubercle of third rib (UBERON:1200158) | human_reference_atlas | | superior articular facet of seventh cervical vertebra (UBERON:1200241) | human_reference_atlas | | sternal end of fourth rib (UBERON:1200213) | human_reference_atlas | | crista galla of ethmoid bone (UBERON:1200031) | human_reference_atlas | | ethmoidal bulla of ethmoid bone (UBERON:1200035) | human_reference_atlas | | infraspinous fossa of scapula (UBERON:1200112) | human_reference_atlas | | hiatus and groove of petrous part of temporal bone for greater petrosal nerve (UBERON:1200074) | human_reference_atlas | | olecranon (UBERON:0006810) | human_reference_atlas | | internal occipital protuberance of squamous part of occipital bone (UBERON:1200116) | human_reference_atlas | | inferior nuchal line of squamous part of occipital bone (UBERON:1200108) | human_reference_atlas | | longitudinal muscle layer of muscular coat (UBERON:0012369) | human_reference_atlas | | calcaneal sulcus of calcaneus (UBERON:1200025) | human_reference_atlas | | sublingual gland ducto-acinar unit (UBERON:8000012) | human_reference_atlas | | inferior vertebral notch of first cervical vertebra (UBERON:1200109) | human_reference_atlas | | aryepiglotticus muscle (UBERON:0011025) | human_reference_atlas | | pubic crest of pubis of os coxa (UBERON:1200183) | human_reference_atlas | | inferior articular facet of first thoracic vertebra (UBERON:1200089) | human_reference_atlas | | tympanic caniliculus of petrous part of temporal bone (UBERON:1200286) | human_reference_atlas | | groove for posterior deep temporal artery of squamous part of temporal bone (UBERON:1200058) | human_reference_atlas | | mandibular angle of mandible (UBERON:1200134) | human_reference_atlas | | vertebral arch of first thoracic vertebra (UBERON:1200294) | human_reference_atlas | | rectus capitis posterior minor (UBERON:0008455) | human_reference_atlas | | coronoid fossa of humerus (UBERON:1200027) | human_reference_atlas | | iliac tuberosity of ilium of os coxa (UBERON:1200081) | human_reference_atlas | | non-articular facet of tubercle of fifth rib (UBERON:1200150) | human_reference_atlas | | costal groove of first rib (UBERON:1200028) | human_reference_atlas | | median sacral crest of sacrum (UBERON:1200143) | human_reference_atlas | | lateral sacral crest of sacrum (UBERON:1200125) | human_reference_atlas | | hyoid bone lesser horn (UBERON:0003998) | human_reference_atlas | | groove for vertebral artery of first cervical vertebra (UBERON:1200066) | human_reference_atlas | | transverse costal facet of fourth thoracic vertebra (UBERON:1200269) | human_reference_atlas | | body of calcaneus (UBERON:1200022) | human_reference_atlas | | base of first proximal phalanx of hand (UBERON:1200021) | human_reference_atlas | | sternal end of eighth rib (UBERON:1200209) | human_reference_atlas | | head of second middle phalanx of foot (UBERON:1200070) | human_reference_atlas | | frontal sinus (UBERON:0001760) | human_reference_atlas | | arcuate line of ilium of os coxa (UBERON:1200014) | human_reference_atlas | | inferior costal facet of tenth thoracic vertebra (UBERON:1200106) | human_reference_atlas | | ectocervical epithelium (UBERON:0012251) | human_reference_atlas | | mylohyoid line of mandible (UBERON:1200146) | human_reference_atlas | | radial tuberosity of radius (UBERON:1200188) | human_reference_atlas | | superior articular facet of third cervical vertebra (UBERON:1200246) | human_reference_atlas | | inferior articular facet of tenth thoracic vertebra (UBERON:1200099) | human_reference_atlas | | cervical squamo-columnar junction (UBERON:0012253) | human_reference_atlas | | pubic tubercle of pubis of os coxa (UBERON:1200185) | human_reference_atlas | | pubic symphysis (UBERON:0003699) | human_reference_atlas | | inferior pubic ramus (UBERON:0014439) | human_reference_atlas | | sacral cornu of sacrum (UBERON:1200191) | human_reference_atlas | | carotid canal (UBERON:0006668) | human_reference_atlas | | sternal region bone (UBERON:1200221) | human_reference_atlas | | posterior internodal tract (UBERON:0015127) | human_reference_atlas | | hyoid region bone (UBERON:1200076) | human_reference_atlas | | parotid gland ducto-acinar unit (UBERON:8000011) | human_reference_atlas | | gluteal surface of ilium of os coxa (UBERON:1200050) | human_reference_atlas | | superior vertebral notch of first cervical vertebra (UBERON:1200255) | human_reference_atlas | | superior articular facet of eleventh thoracic vertebra (UBERON:1200227) | human_reference_atlas | | dorsum sellae of sphenoid bone (UBERON:1200033) | human_reference_atlas | | thyropharyngeus musc

Authors 29

1. Chris J Mungall

   Lawrence Berkeley National Laboratory

   Affiliation as printed

   Lawrence Berkeley National Laboratory

2. Damien Goutte-Gattat

   German BioImaging – Gesellschaft für Mikroskopie und Bildanalyse

   Affiliation as printed

   German BioImaging e.V

3. Shawn Tan
4. Nicolas Matentzoglu
   Affiliation as printed

   semanticly.ai

5. Aleix Puig

   European Bioinformatics Institute · European Molecular Biology Laboratory · European Molecular Biology Laboratory

   Affiliation as printed

   EBI-EMBL

6. Meghan Balk

   University of Oslo

   Affiliation as printed

   Natural History Museum, University of Oslo

7. David Osumi-Sutherland
   Affiliation as printed

   www.virtualflybrain.org

8. PaulaDuekRoggli
9. paolaroncaglia
10. Nicole Vasilevsky

    Critical Path Institute

    Affiliation as printed

    Critical Path Institute

11. Jim Balhoff

    Renaissance Computing Institute

    Affiliation as printed

    @RENCI

12. Anita Caron
    Affiliation as printed

    ARC Semantics

13. Bill Duncan

    University of Florida

    Affiliation as printed

    University of Florida

14. Arwa Ibrahim
15. Ray Stefancsik
16. Jasmine Belfiore
17. Vassilis Virvilis

    Biovista (United States)

    Affiliation as printed

    Biovista Inc

18. CEastwood
19. Maria Keays
20. Martin Larralde Aachen LUMC (ex EMBL) @zellerlab

    Leiden University Medical Center

    Affiliation as printed

    LUMC (ex EMBL) @zellerlab

21. Charles Tapley Hoyt Aachen

    RWTH Aachen University

    Affiliation as printed

    RWTH Aachen University

22. Harshad
23. Wasila Dahdul
24. Dragon-AI Agent
    Affiliation as printed

    Monarch Initiative

25. Tom Gillespie
26. helenamachado
27. shawntanzknn
28. Bonita R. Lam

    Agilent Technologies (United States)

    Affiliation as printed

    Agilent Technologies

29. Alida Avola