obophenotype/uberon: 2026-04-01 Release

Zenodo (CERN European Organization for Nuclear Research)

Abstract

What's Changed Add life cycle stage and life cycle temporary boundary as roots by @matentzn in https://github.com/obophenotype/uberon/pull/3646 Add workflows section to ODK YAML config and rm qc by @matentzn in https://github.com/obophenotype/uberon/pull/3644 Add COB import to Uberon by @matentzn in https://github.com/obophenotype/uberon/pull/3645 Replace chebi_slim URL by @aleixpuigb in https://github.com/obophenotype/uberon/pull/3650 adding pluralization for nephridium by @cmungall in https://github.com/obophenotype/uberon/pull/3373 stratum corneum of esophageal epithelium by @JABelfiore in https://github.com/obophenotype/uberon/pull/3424 Subdivision_of now SubProp of part_of by @dosumis in https://github.com/obophenotype/uberon/pull/3320 Add suprasellar region term by @cmungall in https://github.com/obophenotype/uberon/pull/3526 Issue 3027 by @meghalithic in https://github.com/obophenotype/uberon/pull/3516 Fixes #3427 NTR- epithelium of anorectum by @Caroline-99 in https://github.com/obophenotype/uberon/pull/3430 Fix logical definition of 'pigment epithelium of eye' by @cmungall in https://github.com/obophenotype/uberon/pull/3538 Adding gross anatomical part. Fixes #2921 by @cmungall in https://github.com/obophenotype/uberon/pull/3374 Add 'emquardokus' to ai-controllers list by @dosumis in https://github.com/obophenotype/uberon/pull/3610 Move disjoint axioms from edit file to component by @aleixpuigb in https://github.com/obophenotype/uberon/pull/3652 Issue 2951 by @meghalithic in https://github.com/obophenotype/uberon/pull/3517 Add namespace validation test to Makefile by @matentzn in https://github.com/obophenotype/uberon/pull/3654 Remove myself as "code owner". by @gouttegd in https://github.com/obophenotype/uberon/pull/3655 Replace various :DOS provenance xrefs with orcids by @matentzn in https://github.com/obophenotype/uberon/pull/3615 Deprecate UBERONs "processual entity" by @matentzn in https://github.com/obophenotype/uberon/pull/3647 Add zhengj2007 to ai-controllers list by @cmungall in https://github.com/obophenotype/uberon/pull/3658 make multicellular organism and organism substance disjoint by @matentzn in https://github.com/obophenotype/uberon/pull/3659 Remove redundant subClassOf axioms with cardinality restriction preservation by @dragon-ai-agent in https://github.com/obophenotype/uberon/pull/3611 add subset tag for added_by_HRA by @nicolevasilevsky in https://github.com/obophenotype/uberon/pull/3673 add new terms for HRA/HuBMAP by @nicolevasilevsky in https://github.com/obophenotype/uberon/pull/3671 Add HRA skeleton component with 386 new skeletal terms by @dosumis in https://github.com/obophenotype/uberon/pull/3679 Update HRA skeleton template and align template prefix declarations by @ubyndr in https://github.com/obophenotype/uberon/pull/3686 Uberon release v2026-04-01 by @ubyndr in https://github.com/obophenotype/uberon/pull/3688 Full Changelog: https://github.com/obophenotype/uberon/compare/v2025-12-04...v2026-04-01

Authors 29

1. Chris J Mungall

   Lawrence Berkeley National Laboratory

   Affiliation as printed

   Lawrence Berkeley National Laboratory

2. Damien Goutte-Gattat

   German BioImaging – Gesellschaft für Mikroskopie und Bildanalyse

   Affiliation as printed

   German BioImaging e.V

3. Shawn Tan
4. Nicolas Matentzoglu
   Affiliation as printed

   semanticly.ai

5. Aleix Puig

   European Bioinformatics Institute · European Molecular Biology Laboratory · European Molecular Biology Laboratory

   Affiliation as printed

   EBI-EMBL

6. Meghan A. Balk

   University of Oslo

   Affiliation as printed

   Natural History Museum, University of Oslo

7. David Osumi-Sutherland
   Affiliation as printed

   www.virtualflybrain.org

8. PaulaDuekRoggli
9. paolaroncaglia
10. Nicole Vasilevsky

    Critical Path Institute

    Affiliation as printed

    Critical Path Institute

11. Jim Balhoff

    Renaissance Computing Institute

    Affiliation as printed

    @RENCI

12. Anita Caron
    Affiliation as printed

    ARC Semantics

13. Bill Duncan

    University of Florida

    Affiliation as printed

    University of Florida

14. Arwa Ibrahim
15. Ray Stefancsik
16. Jasmine Belfiore
17. Vassilis Virvilis

    Biovista (United States)

    Affiliation as printed

    Biovista Inc

18. CEastwood
19. Maria Keays
20. Martin Larralde Aachen LUMC (ex EMBL) @zellerlab

    Leiden University Medical Center

    Affiliation as printed

    LUMC (ex EMBL) @zellerlab

21. Harshad
22. Wasila Dahdul
23. Charles Tapley Hoyt Aachen

    RWTH Aachen University

    Affiliation as printed

    RWTH Aachen University

24. Tom Gillespie
25. helenamachado
26. Dragon-AI Agent
    Affiliation as printed

    Monarch Initiative

27. Alida Avola
28. Bonita R. Lam

    Agilent Technologies (United States)

    Affiliation as printed

    Agilent Technologies

29. shawntanzknn