January 18, 2024 review Open access The diversification of methods for studying cell–cell interactions and communication Nature Reviews Genetics DOI: 10.1038/s41576-023-00685-8 Full text (OA) OpenAlex Authors 0 Author list not loaded yet. Cited by 5 stored of 199 Search Sort Most cited Newest Oldest Patent citations Title Any typearticle review book-chapter conference-paper preprint dissertation book dataset other Any fieldAgricultural and Biological Sciences Arts and Humanities Biochemistry, Genetics and Molecular Biology Business, Management and Accounting Chemical Engineering Chemistry Computer Science Decision Sciences Dentistry Earth and Planetary Sciences Economics, Econometrics and Finance Energy Engineering Environmental Science Health Professions Immunology and Microbiology Materials Science Mathematics Medicine Neuroscience Nursing Pharmacology, Toxicology and Pharmaceutics Physics and Astronomy Psychology Social Sciences Veterinary Open access Advances and challenges in cell–cell communication inference: a comprehensive review of tools, resources, and future directions 2025 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 39 citations scACCorDiON: a clustering approach for explainable patient level cell–cell communication graph analysis 2025 Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 3 citations scACCorDiON: A clustering approach for explainable patient level cell cell communication graph analysis 2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 0 citations VIB Hackathon on spatial omics tools and methods 2024 preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 0 citations New tools to study renal fibrogenesis 2024 Current Opinion in Nephrology & Hypertension article Medicine Chronic Kidney Disease and Diabetes Open access 6 citations 5 results References 7 Search Sort Most cited Newest Oldest Patent citations Title Any typearticle review book-chapter conference-paper preprint dissertation book dataset other Any fieldAgricultural and Biological Sciences Arts and Humanities Biochemistry, Genetics and Molecular Biology Business, Management and Accounting Chemical Engineering Chemistry Computer Science Decision Sciences Dentistry Earth and Planetary Sciences Economics, Econometrics and Finance Energy Engineering Environmental Science Health Professions Immunology and Microbiology Materials Science Mathematics Medicine Neuroscience Nursing Pharmacology, Toxicology and Pharmaceutics Physics and Astronomy Psychology Social Sciences Veterinary Open access Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches 2022 Cell article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 4 patents 1,021 citations Spatial multi-omic map of human myocardial infarction 2022 Nature article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 764 citations Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data 2022 Nature Communications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 1 patent 670 citations Integrated intra‐ and intercellular signaling knowledge for multicellular omics analysis 2021 Molecular Systems Biology article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access 406 citations Explainable multiview framework for dissecting spatial relationships from highly multiplexed data 2022 Genome biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 291 citations CrossTalkeR: analysis and visualization of ligand–receptorne tworks 2021 Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 58 citations GraphComm: A Graph-based Deep Learning Method to Predict Cell-Cell Communication in single-cell RNAseq data 2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 13 citations 7 results