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Exploring engineered vesiculation by Pseudomonas putida KT2440 for natural product biosynthesis

Microbial Biotechnology, vol. 17, pp. e14312

Abstract

Pseudomonas species have become promising cell factories for the production of natural products due to their inherent robustness. Although these bacteria have naturally evolved strategies to cope with different kinds of stress, many biotechnological applications benefit from engineering of optimised chassis strains with specially adapted tolerance traits. Here, we explored the formation of outer membrane vesicles (OMV) of Pseudomonas putida KT2440. We found OMV production to correlate with the recombinant production of a natural compound with versatile beneficial properties, the tripyrrole prodigiosin. Further, several P. putida genes were identified, whose up- or down-regulated expression allowed controlling OMV formation. Finally, genetically triggering vesiculation in production strains of the different alkaloids prodigiosin, violacein, and phenazine-1-carboxylic acid, as well as the carotenoid zeaxanthin, resulted in up to three-fold increased product yields. Consequently, our findings suggest that the construction of robust strains by genetic manipulation of OMV formation might be developed into a useful tool which may contribute to improving limited biotechnological applications.

Authors 16

  1. Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

  2. Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

  3. Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

  4. Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

  5. Helmholtz Centre for Environmental Research

    Affiliation as printed

    Department of Environmental Biotechnology Helmholtz Centre for Environmental Research (UFZ) Leipzig Germany

    Department of Environmental Biotechnology, Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany

  6. Helmholtz Centre for Environmental Research

    Affiliation as printed

    Department of Environmental Biotechnology Helmholtz Centre for Environmental Research (UFZ) Leipzig Germany

    Department of Environmental Biotechnology, Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany

  7. Forschungszentrum Jülich

    Affiliation as printed

    Institute of Biological Information Processing – Structural Biochemistry (IBI‐7: Structural Biochemistry) Forschungszentrum Jülich Jülich Germany

  8. Forschungszentrum Jülich · Ernst Ruska Centre

    Affiliation as printed

    Ernst‐Ruska Centre for Microscopy and Spectroscopy with Electrons (ER‐C‐3/Structural Biology) Forschungszentrum Jülich Jülich Germany

    Institute for Biological Information Processing 6 (IBI‐6/ Structural Cellular Biology) Forschungszentrum Jülich Jülich Germany

  9. Forschungszentrum Jülich · Ernst Ruska Centre

    Affiliation as printed

    Ernst‐Ruska Centre for Microscopy and Spectroscopy with Electrons (ER‐C‐3/Structural Biology) Forschungszentrum Jülich Jülich Germany

    Institute for Biological Information Processing 6 (IBI‐6/ Structural Cellular Biology) Forschungszentrum Jülich Jülich Germany

  10. Forschungszentrum Jülich · Ernst Ruska Centre · Heinrich Heine University Düsseldorf

    Affiliation as printed

    Department of Biology Heinrich Heine University Düsseldorf Düsseldorf Germany

    Ernst‐Ruska Centre for Microscopy and Spectroscopy with Electrons (ER‐C‐3/Structural Biology) Forschungszentrum Jülich Jülich Germany

    Institute for Biological Information Processing 6 (IBI‐6/ Structural Cellular Biology) Forschungszentrum Jülich Jülich Germany

  11. Bielefeld University

    Affiliation as printed

    Bielefeld University, Medical School East Westphalia‐Lippe Bielefeld University Bielefeld Germany

    Center for Biotechnology (CeBiTec) Bielefeld University Bielefeld Germany

    Bielefeld University, Medical School East Westphalia-Lippe, Bielefeld University, Bielefeld, Germany

    Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany

  12. Bielefeld University

    Affiliation as printed

    Center for Biotechnology (CeBiTec) Bielefeld University Bielefeld Germany

    Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany

  13. DWI – Leibniz Institute for Interactive Materials · RWTH Aachen University

    Affiliation as printed

    DWI─Leibniz‐Institute for Interactive Materials Aachen Germany

    Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry RWTH Aachen University Aachen Germany

    Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Aachen, Germany

  14. Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

  15. Forschungszentrum Jülich · Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Bio‐ and Geosciences IBG‐1: Biotechnology Forschungszentrum Jülich Jülich Germany

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

  16. Anita Loeschcke corresponding

    Heinrich Heine University Düsseldorf

    Affiliation as printed

    Institute of Molecular Enzyme Technology (IMET) Heinrich Heine University Düsseldorf Düsseldorf Germany

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References 105